Non-Coding RNA Search

rpigcb_5234.y1

Sequence:


               
               ACAATGAGGAGTTGTTGAAATTGTGAGCCTTAGTAGCCATCTTTACTTTACTCAAGTACT
GTTTAGGAAAAAAAAATTGACATATGCCTTTATTTTTATGCCTTTTTTTGTGGACAAAAT
CAGAAGAATTTAAGTGACTTGTTGCAGGTTGTGAAGATTCAGTGGGTAAGTCAGAACTGA
AACTTCAGTATTCCTGACTCATATTCTTGTGCTTGTTTATAAGATTCATGGCTCTCAGAA
TAACTGAACACTTCTTTTGGGACCCTTAAAATGAAAGTGTGTATTTTTACTGATTAGACT
TTCATTTTTAGACATTTCACAATTCTTTGACCTTAAAGACTTTTCCCATGGTCATAGTTC
CTTATTAAGTCAATGCAACTGTGAAAAATCTCACTTTGCTGTTGAATAGTAATTCAAAAT
ACAAGTTTGATCAGATTTCCTTTTACATTTAAATAACCTTCATGATTCACTCATAACTCT
A

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACAATGAGGAGTTGTTGAAATTGTGAGCCTTAGTAGCCATCTTTACTTTACTCAAGTACT
GTTTAGGAAAAAAAAATTGACATATGCCTTTATTTTTATGCCTTTTTTTGTGGACAAAAT
CAGAAGAATTTAAGTGACTTGTTGCAGGTTGTGAAGATTCAGTGGGTAAGTCAGAACTGA
AACTTCAGTATTCCTGACTCATATTCTTGTGCTTGTTTATAAGATTCATGGCTCTCAGAA
TAACTGAACACTTCTTTTGGGACCCTTAAAATGAAAGTGTGTATTTTTACTGATTAGACT
TTCATTTTTAGACATTTCACAATTCTTTGACCTTAAAGACTTTTCCCATGGTCATAGTTC
CTTATTAAGTCAATGCAACTGTGAAAAATCTCACTTTGCTGTTGAATAGTAATTCAAAAT
ACAAGTTTGATCAGATTTCCTTTTACATTTAAATAACCTTCATGATTCACTCATAACTCT
A

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               9-480, gnl|bosTau2|chr1 (57029561-57029093)
               

               
               9-480, gnl|Hg17|chr3 (180219257-180218774)
               

               
               9-480, gnl|Mm7|chr3 (32145136-32144557)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               9-480, gnl|bosTau2|chr1 (57029561-57029093)
               

               
               9-480, gnl|Hg17|chr3 (180219257-180218774)
               

               
               9-480, gnl|Mm7|chr3 (32145136-32144557)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cty (0.10408)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cty (0.10408)

	9-480, gnl\|bosTau2\|chr1 (57029561-57029093)
	9-480, gnl\|Hg17\|chr3 (180219257-180218774)
	9-480, gnl\|Mm7\|chr3 (32145136-32144557)