rpigcb_8437.y1
|
TGTTCTAAGACAGGCTATATTTTCTTTCAAATTCCTACTTCCTGAAACGGAGGCTGTTTA
TGAGAAACAGTATGTTTCAGGAAGGTTGTGCTATAATTAACTTTTTTTTCCCCCGAGTTA
CATTGGCTGGTTTTAAGGTGCTTTTCCTCTTCTACGAGATAAAGGTACCTCAGCCTTGAA
GGGGCTCTTTTATTGAGGATCGATGTCTTCTCCTGGGTAATTGATCACTGTAGGCCCAGG
GACACTCGACTCATCATTGAGGGAGGGTGATCATCATGAATAATCAAAAAGCTGTAGCTG
CGCTACTGCAGGAGTGCAAGCAAGTGCTGGACCAGCTCTTGTTGGAGGCGTCAGATGTGT
CGGAGGAGGACAAGAGGGAGGACCAGCGGTGCAGAGCTTCACTCCCCAGCGAGTTAAGAA
CCCTGATCCAGGAGGCAAAGGAAATGAAGTGGCCCTTCGTGCCTGAAAAGTGGCAGTACA
AACAAGCCGTGGGCCCAGAGGACAAAACAAACCTGCAGGATGTGATTGGCGCCGGGTTGC
AGCAGTTACTG
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
TGTTCTAAGACAGGCTATATTTTCTTTCAAATTCCTACTTCCTGAAACGGAGGCTGTTTA
TGAGAAACAGTATGTTTCAGGAAGGTTGTGCTATAATTAACTTTTTTTTCCCCCGAGTTA
CATTGGCTGGTTTTAAGGTGCTTTTCCTCTTCTACGAGATAAAGGTACCTCAGCCTTGAA
GGGGCTCTTTTATTGAGGATCGATGTCTTCTCCTGGGTAATTGATCACTGTAGGCCCAGG
GACACTCGACTCATCATTGAGGGAGGGTGATCATCATGAATAATCAAAAAGCTGTAGCTG
CGCTACTGCAGGAGTGCAAGCAAGTGCTGGACCAGCTCTTGTTGGAGGCGTCAGATGTGT
CGGAGGAGGACAAGAGGGAGGACCAGCGGTGCAGAGCTTCACTCCCCAGCGAGTTAAGAA
CCCTGATCCAGGAGGCAAAGGAAATGAAGTGGCCCTTCGTGCCTGAAAAGTGGCAGTACA
AACAAGCCGTGGGCCCAGAGGACAAAACAAACCTGCAGGATGTGATTGGCGCCGGGTTGC
AGCAGTTACTG
|
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gi|61858948|ref|XP_597260.1| |
Protein identifier
|
gi|61858948|ref|XP_597260.1| |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
163-396, gnl|bosTau2|chr6 (4793027-4793260) |
|
163-396, gnl|canFam2|chr32 (35130326-35130748) |
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163-396, gnl|dasNov1|scaffold_3890 (42778-42387) |
|
163-396, gnl|echTel1|scaffold_302328 (528-941) |
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163-396, gnl|galGal2|chr4 (57687840-57687508) |
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163-396, gnl|hg17|chr4 (113656365-113656770) |
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163-396, gnl|Hg17|chr4 (113656436-113656658) |
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163-396, gnl|loxAfr1|scaffold_55599 (7665-7243) |
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163-396, gnl|mm7|chr3 (127567066-127566651) |
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163-396, gnl|Mm7|chr3 (127566994-127566762) |
|
163-396, gnl|monDom2|scaffold_9 (81629592-81629181) |
|
163-396, gnl|panTro1|chr3 (130229640-130230045) |
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163-396, gnl|rheMac2|chr5 (105221013-105221418) |
|
163-396, gnl|rn3|chr2 (224976684-224976268) |
|
163-396, gnl|xenTro1|scaffold_445 (803354-802944) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
163-396, gnl|bosTau2|chr6 (4793027-4793260) |
|
163-396, gnl|canFam2|chr32 (35130326-35130748) |
|
163-396, gnl|dasNov1|scaffold_3890 (42778-42387) |
|
163-396, gnl|echTel1|scaffold_302328 (528-941) |
|
163-396, gnl|galGal2|chr4 (57687840-57687508) |
|
163-396, gnl|hg17|chr4 (113656365-113656770) |
|
163-396, gnl|Hg17|chr4 (113656436-113656658) |
|
163-396, gnl|loxAfr1|scaffold_55599 (7665-7243) |
|
163-396, gnl|mm7|chr3 (127567066-127566651) |
|
163-396, gnl|Mm7|chr3 (127566994-127566762) |
|
163-396, gnl|monDom2|scaffold_9 (81629592-81629181) |
|
163-396, gnl|panTro1|chr3 (130229640-130230045) |
|
163-396, gnl|rheMac2|chr5 (105221013-105221418) |
|
163-396, gnl|rn3|chr2 (224976684-224976268) |
|
163-396, gnl|xenTro1|scaffold_445 (803354-802944) |
