Non-Coding RNA Search

rpigcb_8644.y1

Sequence:


               
               ATCTCCGTTTGGCAGCATCCAAGAAACAGTCTGCCTTAAAGTGTGTGTCCTACTTGGGGT
ATGTAGCTCCCTTTGCATAGGGACCATATGGCCAGTTCCAACTAGTACCAAGGTTTCTAT
GTACATAATAGTTTACAAAGAATTTAAGATTCAGACCATTGGTTGAAAATAACTTTAAAA
AAAATTTTTTTTAACTTAAAATTCAGTTTGAAGTGCCTGGTTTATAAAATCAGATTCCTT
GATTATGCCTTTCTCTTTTAAATTGACTAATTTTGCTGATTAAACTGAAAGCCCTGGGCT
CAATTGTGATGACTTACTGATAAAATTGTTGCTTGGTGGTTGGAGGGCCTACAGTGCTAT
GACTTTTATTAAATTGTCCTTGTTTTCCCAAATACCAATGTAACCATCTCCAGATTTCAT
TACTCAGTTACGCAAGTTAAAAAATCACCCTGTAAATGACTGTTTGGGTTACCAAGTACA
TTGTCTGCTGAGGAAGGGTACATCTTCCTGACATTACAAGGAGCCATCATCTCCTCTAAA
CACACGCTCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATCTCCGTTTGGCAGCATCCAAGAAACAGTCTGCCTTAAAGTGTGTGTCCTACTTGGGGT
ATGTAGCTCCCTTTGCATAGGGACCATATGGCCAGTTCCAACTAGTACCAAGGTTTCTAT
GTACATAATAGTTTACAAAGAATTTAAGATTCAGACCATTGGTTGAAAATAACTTTAAAA
AAAATTTTTTTTAACTTAAAATTCAGTTTGAAGTGCCTGGTTTATAAAATCAGATTCCTT
GATTATGCCTTTCTCTTTTAAATTGACTAATTTTGCTGATTAAACTGAAAGCCCTGGGCT
CAATTGTGATGACTTACTGATAAAATTGTTGCTTGGTGGTTGGAGGGCCTACAGTGCTAT
GACTTTTATTAAATTGTCCTTGTTTTCCCAAATACCAATGTAACCATCTCCAGATTTCAT
TACTCAGTTACGCAAGTTAAAAAATCACCCTGTAAATGACTGTTTGGGTTACCAAGTACA
TTGTCTGCTGAGGAAGGGTACATCTTCCTGACATTACAAGGAGCCATCATCTCCTCTAAA
CACACGCTCT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               65-516, gnl|bosTau2|chr29 (29031620-29032078)
               

               
               65-516, gnl|Hg17|chr11 (129604180-129603702)
               

               
               65-516, gnl|Mm7|chr9 (30973175-30973568)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               65-516, gnl|bosTau2|chr29 (29031620-29032078)
               

               
               65-516, gnl|Hg17|chr11 (129604180-129603702)
               

               
               65-516, gnl|Mm7|chr9 (30973175-30973568)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cty (0.10408)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cty (0.10408)

	65-516, gnl\|bosTau2\|chr29 (29031620-29032078)
	65-516, gnl\|Hg17\|chr11 (129604180-129603702)
	65-516, gnl\|Mm7\|chr9 (30973175-30973568)