Non-Coding RNA Search

rpigcb_9185.y1

Sequence:


               
               AAGTTTTATACTGGAATTATTCGATTAATTAATGAAATTATTTTAATTTAATGTTAGTCC
CTGAAAGAATTCAGTGTAGATTCATTTTACTGTCTTTTCCTGTTCTTCCTTAATGGTGAC
ATGTGTTTTTATGTTCTGACATCTATAACTATTTATTCCAGAAAAAAAGTCCTTTCTTTT
ATACTGTGTTCAGGATCCCTGTTGAGATAGAACCATCTTGATCATTCTGGCACTATTAAC
TAATCTTTGAATGAAATGCTCAAGAGGGATGAGTGGTAACATAAAACTTACACGATTCTG
AGTTCGTAATCGTGAATTGCTTCTTTCAGTGTATCACAGACAATTATATAGTAATGGCAT
TGTGTTGTTATAATATTATGGTTAGGTGGAAGTGAAAGCAGTTCCTGTTTCTCAGAAAAA
AACATCTTTACAACAAGAGCAAGTAAAGAAGCCTCAGAGGATTCCTGGCAGTCCCGCAGT
AACAGCTGCATCTTCAAATGCTGACATGACTTTTGGCGGGCTCGCGTCACCAAAACTGGA
TGTTTCTTATGAGCCAATGATAGTGAAGGAAGCGCGATATA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAGTTTTATACTGGAATTATTCGATTAATTAATGAAATTATTTTAATTTAATGTTAGTCC
CTGAAAGAATTCAGTGTAGATTCATTTTACTGTCTTTTCCTGTTCTTCCTTAATGGTGAC
ATGTGTTTTTATGTTCTGACATCTATAACTATTTATTCCAGAAAAAAAGTCCTTTCTTTT
ATACTGTGTTCAGGATCCCTGTTGAGATAGAACCATCTTGATCATTCTGGCACTATTAAC
TAATCTTTGAATGAAATGCTCAAGAGGGATGAGTGGTAACATAAAACTTACACGATTCTG
AGTTCGTAATCGTGAATTGCTTCTTTCAGTGTATCACAGACAATTATATAGTAATGGCAT
TGTGTTGTTATAATATTATGGTTAGGTGGAAGTGAAAGCAGTTCCTGTTTCTCAGAAAAA
AACATCTTTACAACAAGAGCAAGTAAAGAAGCCTCAGAGGATTCCTGGCAGTCCCGCAGT
AACAGCTGCATCTTCAAATGCTGACATGACTTTTGGCGGGCTCGCGTCACCAAAACTGGA
TGTTTCTTATGAGCCAATGATAGTGAAGGAAGCGCGATATA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               75-581, gnl|bosTau2|chr12 (26077448-26077955)
               

               
               75-581, gnl|Hg17|chr13 (76623394-76622890)
               

               
               75-581, gnl|Mm7|chr14 (97627543-97627081)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               75-581, gnl|bosTau2|chr12 (26077448-26077955)
               

               
               75-581, gnl|Hg17|chr13 (76623394-76622890)
               

               
               75-581, gnl|Mm7|chr14 (97627543-97627081)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cty (0.10408)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cty (0.10408)

	75-581, gnl\|bosTau2\|chr12 (26077448-26077955)
	75-581, gnl\|Hg17\|chr13 (76623394-76622890)
	75-581, gnl\|Mm7\|chr14 (97627543-97627081)