Non-Coding RNA Search

rpigcb_9782.y1

Sequence:


               
               TGAGGTGAACATACCATTCATTTGTGAAATGTGCATGCTCTGATTGAGGCTGTAGGTTAC
CGCATAGGTTCTGTGAAAGGTGGTGGCTGTAGACCGCTGATGCCATCCAGTTTCCACAGG
AACCATTCTCACGAGAACCACAGAGTACATGTATGTCTTCCCTGAGTCCTTAAGAATTTT
TATCAGGGTTATATTATAGCACACTTGAATGAAATTTGTCTAATGCAGTTTGACTCATGT
TAGAAAATAATCCAGGTTATTATGAATTTTGTAAGGGTCCGTCACTTAGGATAAAATAGC
CTAACTAGTTTACAGATGTAAAAGCAATTGTTCTAGAAAGAATACACATTTGTATTAGGT
ATAGTATGGTTTTTAGCAGATTTTTGGTGGCTTGATGATGATGAATATAAGCTAAATGAG
AACCACAGGTTATGCAAAACACTAAAGCCAGCTTGGTGATTTTAGTTGAATGTCCTGTCT
TCCTTTCTCTAGTCCATGTGAAGTCTTCATGGAAAATGACAAGCAGTGGATCACATATGT
GGTTATAGCAGATTCAGAAGCTAGCTGTCTGGAAATTAGAACTGCCCCAAGGCAGAGAAA
AAATGGATATAGAAGCCTCAAAAAAAGCGTGAACTTTCTAGGTGAAAGATGATTTACTAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGAGGTGAACATACCATTCATTTGTGAAATGTGCATGCTCTGATTGAGGCTGTAGGTTAC
CGCATAGGTTCTGTGAAAGGTGGTGGCTGTAGACCGCTGATGCCATCCAGTTTCCACAGG
AACCATTCTCACGAGAACCACAGAGTACATGTATGTCTTCCCTGAGTCCTTAAGAATTTT
TATCAGGGTTATATTATAGCACACTTGAATGAAATTTGTCTAATGCAGTTTGACTCATGT
TAGAAAATAATCCAGGTTATTATGAATTTTGTAAGGGTCCGTCACTTAGGATAAAATAGC
CTAACTAGTTTACAGATGTAAAAGCAATTGTTCTAGAAAGAATACACATTTGTATTAGGT
ATAGTATGGTTTTTAGCAGATTTTTGGTGGCTTGATGATGATGAATATAAGCTAAATGAG
AACCACAGGTTATGCAAAACACTAAAGCCAGCTTGGTGATTTTAGTTGAATGTCCTGTCT
TCCTTTCTCTAGTCCATGTGAAGTCTTCATGGAAAATGACAAGCAGTGGATCACATATGT
GGTTATAGCAGATTCAGAAGCTAGCTGTCTGGAAATTAGAACTGCCCCAAGGCAGAGAAA
AAATGGATATAGAAGCCTCAAAAAAAGCGTGAACTTTCTAGGTGAAAGATGATTTACTAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-660, gnl|bosTau2|chr4 (22272717-22272056)
               

               
               1-660, gnl|Hg17|chr7 (104350412-104349730)
               

               
               1-660, gnl|Mm7|chr5 (22546333-22545593)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-660, gnl|bosTau2|chr4 (22272717-22272056)
               

               
               1-660, gnl|Hg17|chr7 (104350412-104349730)
               

               
               1-660, gnl|Mm7|chr5 (22546333-22545593)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cty (0.10408)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cty (0.10408)

	1-660, gnl\|bosTau2\|chr4 (22272717-22272056)
	1-660, gnl\|Hg17\|chr7 (104350412-104349730)
	1-660, gnl\|Mm7\|chr5 (22546333-22545593)