rpigcb_9783.y1
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CTTCCAAAAGGCTCTCCAAGGATTTGTTCCTGCATCTCTGAGAAATGTCAACCTAAATAA ACCTAGGGACCTGGGCTGGGATCACATTGGTGGATTACGTGAAGTTCGGCAGATCCTTAT GGATACAATCCAGTTACCAGCCAAGTACCCAGAGTTATTTGCAAACTTGCCCATACGACA AAGAACAGGAGTACTACTGTATGGTCCTCCTGGAACGGGAAAAACCTTACTAGCTGGAGT AGTTGCACGAGAGAGTGGAATGAATTTTATTAGTGTTAAGGGGCCAGAGTTACTCAGCAA ATATATTGGAGCAAGTGAACAAGCTGTTCGGGATATTTTTATTAGAGCACAGGCTGCGAA GCCCTGCATTCTTTTCTTTGATGAATTTGAATCCATCGCTCCTCGACGAGGCCATGATAA TACAGGGGTCACAGACCGTGTAGTTAACCAGTTGCTGACTCAGTTGGATGGAGTAGAAGG CTTACAGGGTGTTTATGTTTTGGCTGCTACCAGTCGCCCTGA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CTTCCAAAAGGCTCTCCAAGGATTTGTTCCTGCATCTCTGAGAAATGTCAACCTAAATAA ACCTAGGGACCTGGGCTGGGATCACATTGGTGGATTACGTGAAGTTCGGCAGATCCTTAT GGATACAATCCAGTTACCAGCCAAGTACCCAGAGTTATTTGCAAACTTGCCCATACGACA AAGAACAGGAGTACTACTGTATGGTCCTCCTGGAACGGGAAAAACCTTACTAGCTGGAGT AGTTGCACGAGAGAGTGGAATGAATTTTATTAGTGTTAAGGGGCCAGAGTTACTCAGCAA ATATATTGGAGCAAGTGAACAAGCTGTTCGGGATATTTTTATTAGAGCACAGGCTGCGAA GCCCTGCATTCTTTTCTTTGATGAATTTGAATCCATCGCTCCTCGACGAGGCCATGATAA TACAGGGGTCACAGACCGTGTAGTTAACCAGTTGCTGACTCAGTTGGATGGAGTAGAAGG CTTACAGGGTGTTTATGTTTTGGCTGCTACCAGTCGCCCTGA |
| Aligned organism(s): 38 entry(ies) | More info |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
| 144-281, gnl|bosTau2|chr4 (1389812-1389675) | |
| 144-281, gnl|canFam2|chr14 (21031197-21031340) | |
| 144-281, gnl|danRer3|chr19 (50565505-50565411) | |
| 144-281, gnl|dasNov1|scaffold_33116 (41622-41735) | |
| 144-281, gnl|echTel1|scaffold_317126 (11509-11399) | |
| 144-281, gnl|fr1|chrUn (86994719-86994818) | |
| 144-281, gnl|galGal2|chr2 (21969010-21969124) | |
| 144-281, gnl|hg17|chr7 (91773624-91773762) | |
| 144-281, gnl|Hg17|chr7 (91773805-91773668) | |
| 144-281, gnl|loxAfr1|scaffold_84074 (3811-3933) | |
| 144-281, gnl|mm7|chr5 (3632190-3632049) | |
| 144-281, gnl|Mm7|chr5 (3632004-3632141) | |
| 144-281, gnl|monDom2|scaffold_7 (60468470-60468577) | |
| 144-281, gnl|oryCun1|scaffold_179474 (17009-17146) | |
| 144-281, gnl|panTro1|chr6 (93329896-93330034) | |
| 144-281, gnl|rheMac2|chr3 (124766720-124766588) | |
| 144-281, gnl|rn3|chr4 (27263519-27263660) | |
| 144-281, gnl|tetNig1|chr21 (1072580-1072693) | |
| 144-281, gnl|xenTro1|scaffold_182 (49888-50026) | |
| 344-490, gnl|bosTau2|chr4 (1384233-1384087) | |
| 344-490, gnl|canFam2|chr14 (21027312-21027482) | |
| 344-490, gnl|danRer3|chr19 (50567265-50567106) | |
| 344-490, gnl|dasNov1|scaffold_103512 (4145-4302) | |
| 344-490, gnl|echTel1|scaffold_272190 (6994-7152) | |
| 344-490, gnl|fr1|chrUn (86994358-86994527) | |
| 344-490, gnl|galGal2|chr2 (21967750-21967914) | |
| 344-490, gnl|hg17|chr7 (91768449-91768618) | |
| 344-490, gnl|Hg17|chr7 (91768596-91768450) | |
| 344-490, gnl|loxAfr1|scaffold_84074 (698-858) | |
| 344-490, gnl|mm7|chr5 (3636123-3635958) | |
| 344-490, gnl|Mm7|chr5 (3635974-3636120) | |
| 344-490, gnl|monDom2|scaffold_7 (60465598-60465758) | |
| 344-490, gnl|oryCun1|scaffold_179474 (8678-8849) | |
| 344-490, gnl|panTro1|chr6 (93324730-93324899) | |
| 344-490, gnl|rheMac2|chr3 (124772519-124772350) | |
| 344-490, gnl|rn3|chr4 (27260200-27260370) | |
| 344-490, gnl|tetNig1|chr21 (1072238-1072388) | |
| 344-490, gnl|xenTro1|scaffold_182 (48009-48175) |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 144-281, gnl|bosTau2|chr4 (1389812-1389675) | |
| 144-281, gnl|canFam2|chr14 (21031197-21031340) | |
| 144-281, gnl|danRer3|chr19 (50565505-50565411) | |
| 144-281, gnl|dasNov1|scaffold_33116 (41622-41735) | |
| 144-281, gnl|echTel1|scaffold_317126 (11509-11399) | |
| 144-281, gnl|fr1|chrUn (86994719-86994818) | |
| 144-281, gnl|galGal2|chr2 (21969010-21969124) | |
| 144-281, gnl|hg17|chr7 (91773624-91773762) | |
| 144-281, gnl|Hg17|chr7 (91773805-91773668) | |
| 144-281, gnl|loxAfr1|scaffold_84074 (3811-3933) | |
| 144-281, gnl|mm7|chr5 (3632190-3632049) | |
| 144-281, gnl|Mm7|chr5 (3632004-3632141) | |
| 144-281, gnl|monDom2|scaffold_7 (60468470-60468577) | |
| 144-281, gnl|oryCun1|scaffold_179474 (17009-17146) | |
| 144-281, gnl|panTro1|chr6 (93329896-93330034) | |
| 144-281, gnl|rheMac2|chr3 (124766720-124766588) | |
| 144-281, gnl|rn3|chr4 (27263519-27263660) | |
| 144-281, gnl|tetNig1|chr21 (1072580-1072693) | |
| 144-281, gnl|xenTro1|scaffold_182 (49888-50026) | |
| 344-490, gnl|bosTau2|chr4 (1384233-1384087) | |
| 344-490, gnl|canFam2|chr14 (21027312-21027482) | |
| 344-490, gnl|danRer3|chr19 (50567265-50567106) | |
| 344-490, gnl|dasNov1|scaffold_103512 (4145-4302) | |
| 344-490, gnl|echTel1|scaffold_272190 (6994-7152) | |
| 344-490, gnl|fr1|chrUn (86994358-86994527) | |
| 344-490, gnl|galGal2|chr2 (21967750-21967914) | |
| 344-490, gnl|hg17|chr7 (91768449-91768618) | |
| 344-490, gnl|Hg17|chr7 (91768596-91768450) | |
| 344-490, gnl|loxAfr1|scaffold_84074 (698-858) | |
| 344-490, gnl|mm7|chr5 (3636123-3635958) | |
| 344-490, gnl|Mm7|chr5 (3635974-3636120) | |
| 344-490, gnl|monDom2|scaffold_7 (60465598-60465758) | |
| 344-490, gnl|oryCun1|scaffold_179474 (8678-8849) | |
| 344-490, gnl|panTro1|chr6 (93324730-93324899) | |
| 344-490, gnl|rheMac2|chr3 (124772519-124772350) | |
| 344-490, gnl|rn3|chr4 (27260200-27260370) | |
| 344-490, gnl|tetNig1|chr21 (1072238-1072388) | |
| 344-490, gnl|xenTro1|scaffold_182 (48009-48175) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cty (0.10408) |