Non-Coding RNA Search

rpigcf0_001345.y1

Sequence:


               
               CTTCATTAATTTCTGATGTATAGCAAAGAGATTCAGTTATACATATATACATTCTTTTTC
ATATTCCTTTCCATTATGGCTTATCATAGGATATTGAATATAGTTCCCTGTGCTATCCAG
TAGGACGTTATTGTTTATCTGTCCTATATATAGAATAGTTGGCATTTGCCAATCCCAAAC
TCCCACTCCATCCCTCCCTCATCCTCCCTCCCCACCTTGGCAACCTAAAGTCTGTTCTCC
ATGTCTTTGAGTTTGTTTCTGTTTCATAGGTAGgttcatttgtgttgtatttgaaattcc
acatgtaagtgatatcatatggtatttctctttctctttctgacttatagtctgatttag
tatgataatctctaattgtatccctattgctgcaaatggcattatttcattctgagtaat
attccataatatgtatataccacatcttctttatccattcCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTTCATTAATTTCTGATGTATAGCAAAGAGATTCAGTTATACATATATACATTCTTTTTC
ATATTCCTTTCCATTATGGCTTATCATAGGATATTGAATATAGTTCCCTGTGCTATCCAG
TAGGACGTTATTGTTTATCTGTCCTATATATAGAATAGTTGGCATTTGCCAATCCCAAAC
TCCCACTCCATCCCTCCCTCATCCTCCCTCCCCACCTTGGCAACCTAAAGTCTGTTCTCC
ATGTCTTTGAGTTTGTTTCTGTTTCATAGGTAGgttcatttgtgttgtatttgaaattcc
acatgtaagtgatatcatatggtatttctctttctctttctgacttatagtctgatttag
tatgataatctctaattgtatccctattgctgcaaatggcattatttcattctgagtaat
attccataatatgtatataccacatcttctttatccattcCT

Aligned organism(s): 1 entry(ies)

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Aligned organism(s): 1 entry(ies)

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               1-413, gnl|bosTau2|chr1 (52995201-52994799)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-413, gnl|bosTau2|chr1 (52995201-52994799)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ctl (0.153069)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ctl (0.153069)