Non-Coding RNA Search

rpigcf0_001404.y1

Sequence:


               
               ATTCCTCTATTTTCATAAAATGAATGTTGCGTCTGAAAGATAAAACAGTGACAGTCTATC
AGGGGCCCATACTATTGCGTTGCAGGTTGGAGCATTCTTGCTGTTTTAATTTTTTTTTTT
TTTTTTTTTTTTTTTTTAGTATAAGGATAGGGATTATTTATAAAGGATTATTTGGCCCAG
TGCTCATAAAATGTCTGCATTCTGTTGGTACAACACACAGATCTTTTGCGGTGGTTTTGA
GGAAACCCCAGACTTTTCCATTCTGGGAACAGATGGAGCTCTAAGCTCAACTGCATTTCA
CAACAGGGATGTGTTACTATCTGCCAGTCTGTTTTTACTTTATGTGAGATGTTCTCCTTG
CTAGTCACAGAGTTATTAAGCTTCTGTGAGTATGCAAGCCTGTGAATTTGTTGTGCTGTA
CATTTATAAAAGTTAGGGACACTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATTCCTCTATTTTCATAAAATGAATGTTGCGTCTGAAAGATAAAACAGTGACAGTCTATC
AGGGGCCCATACTATTGCGTTGCAGGTTGGAGCATTCTTGCTGTTTTAATTTTTTTTTTT
TTTTTTTTTTTTTTTTTAGTATAAGGATAGGGATTATTTATAAAGGATTATTTGGCCCAG
TGCTCATAAAATGTCTGCATTCTGTTGGTACAACACACAGATCTTTTGCGGTGGTTTTGA
GGAAACCCCAGACTTTTCCATTCTGGGAACAGATGGAGCTCTAAGCTCAACTGCATTTCA
CAACAGGGATGTGTTACTATCTGCCAGTCTGTTTTTACTTTATGTGAGATGTTCTCCTTG
CTAGTCACAGAGTTATTAAGCTTCTGTGAGTATGCAAGCCTGTGAATTTGTTGTGCTGTA
CATTTATAAAAGTTAGGGACACTC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-444, gnl|bosTau2|chr22 (620066-619632)
               

               
               1-444, gnl|Hg17|chr3 (29161784-29162213)
               

               
               1-444, gnl|Mm7|chr9 (117068159-117067740)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-444, gnl|bosTau2|chr22 (620066-619632)
               

               
               1-444, gnl|Hg17|chr3 (29161784-29162213)
               

               
               1-444, gnl|Mm7|chr9 (117068159-117067740)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ctl (0.153069)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ctl (0.153069)

	1-444, gnl\|bosTau2\|chr22 (620066-619632)
	1-444, gnl\|Hg17\|chr3 (29161784-29162213)
	1-444, gnl\|Mm7\|chr9 (117068159-117067740)