Non-Coding RNA Search

rpigcf0_001406.y1

Sequence:


               
               TGGGTTGCTCCCAAGACAGATGGATCCAGAATGAGACACCAAATTAAATATGTTTCATTT
GCTAAGTAAAATGGTTTTGGTCTGATTCTGTCTCCTACCAGTCGATTCACAAAATGATCC
TGTGAATTGTTTATTCCTCGAGGGACGTGAGTCCTCTCCCGGTGCCAGCCCTGAACCATG
TTTACAAAACTGATGTCTCACCTCCCAGATGAGTGCCCTTTTAATTGAAAAAATTGATTG
GTTTATGGAGGTCTTTACTTTTGTTATCTGATTGGAGATGCTTATAATCCCCAGTCCATT
TCCCTTTATGAGCAATAATTTTCTCACTTACATGTCAACATCTCCAATAAATACATTTCA
ATATTATCCAAGCAGATTGTTACATGAGGGCTTTTTTTTTTTTTTTTTTTTTTTTTTTCG
GCCTTGCACATGTTTTATAGGCAATAAAGGATCTCAGAGCCCATTCCTTATCTTGATTTC
CCCTCTCCTTTGGCGGGGGATGAAAGCGTTAGCCAGTCACGGGCCAAGACTGTGCCCAAC
AGGATGAACTTTTGATGAACACGTAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGGGTTGCTCCCAAGACAGATGGATCCAGAATGAGACACCAAATTAAATATGTTTCATTT
GCTAAGTAAAATGGTTTTGGTCTGATTCTGTCTCCTACCAGTCGATTCACAAAATGATCC
TGTGAATTGTTTATTCCTCGAGGGACGTGAGTCCTCTCCCGGTGCCAGCCCTGAACCATG
TTTACAAAACTGATGTCTCACCTCCCAGATGAGTGCCCTTTTAATTGAAAAAATTGATTG
GTTTATGGAGGTCTTTACTTTTGTTATCTGATTGGAGATGCTTATAATCCCCAGTCCATT
TCCCTTTATGAGCAATAATTTTCTCACTTACATGTCAACATCTCCAATAAATACATTTCA
ATATTATCCAAGCAGATTGTTACATGAGGGCTTTTTTTTTTTTTTTTTTTTTTTTTTTCG
GCCTTGCACATGTTTTATAGGCAATAAAGGATCTCAGAGCCCATTCCTTATCTTGATTTC
CCCTCTCCTTTGGCGGGGGATGAAAGCGTTAGCCAGTCACGGGCCAAGACTGTGCCCAAC
AGGATGAACTTTTGATGAACACGTAC

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               1-559, gnl|bosTau2|chr5 (43320711-43321257)
               

               
               1-559, gnl|Hg17|chr22 (32697847-32698369)
               

               
               1-559, gnl|Mm7|chr8 (71973428-71973943)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-559, gnl|bosTau2|chr5 (43320711-43321257)
               

               
               1-559, gnl|Hg17|chr22 (32697847-32698369)
               

               
               1-559, gnl|Mm7|chr8 (71973428-71973943)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               ctl (0.153069)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ctl (0.153069)

	1-559, gnl\|bosTau2\|chr5 (43320711-43321257)
	1-559, gnl\|Hg17\|chr22 (32697847-32698369)
	1-559, gnl\|Mm7\|chr8 (71973428-71973943)