Non-Coding RNA Search

rpigcf0_002354.y1

Sequence:


               
               GCTGCAGGAATTCGAATTCATCTGGTTCTAGGGTAACAAAGTAACAGGTTTTTCCCTACA
CATTTCCCCACCCCCAGCTAGGTACTGAATCCCAGTATGCAAACAAAAGGGACATATTGT
AGAGGTGATTCATACAGCTGGGGACACAAAAGCCTGCATCAGTCAAAGCCAACAATCAAC
AGCAGCCTGTTAAACTTTGTTCTCTCTACATTGTTTCTCTTTTTTTGGGGAAAAGTGGCG
TGTTTGAATATGTGACATATTCTTTAAAGTTTCCACAATTAAACATTAATGAATGTACCT
CAAAATAACAACTAATTTTCCCTTTTTAAAATAGAAACCCAGGTTTTCATAAATATCTGT
CTGTGCTTTCATCTACATATGTGCTGTTATCCTTCCATAAACTCAATTACAGTTAATTTA
GTCTGTATTGGTAAATGTAGAAAGGCTCTCAGATGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCTGCAGGAATTCGAATTCATCTGGTTCTAGGGTAACAAAGTAACAGGTTTTTCCCTACA
CATTTCCCCACCCCCAGCTAGGTACTGAATCCCAGTATGCAAACAAAAGGGACATATTGT
AGAGGTGATTCATACAGCTGGGGACACAAAAGCCTGCATCAGTCAAAGCCAACAATCAAC
AGCAGCCTGTTAAACTTTGTTCTCTCTACATTGTTTCTCTTTTTTTGGGGAAAAGTGGCG
TGTTTGAATATGTGACATATTCTTTAAAGTTTCCACAATTAAACATTAATGAATGTACCT
CAAAATAACAACTAATTTTCCCTTTTTAAAATAGAAACCCAGGTTTTCATAAATATCTGT
CTGTGCTTTCATCTACATATGTGCTGTTATCCTTCCATAAACTCAATTACAGTTAATTTA
GTCTGTATTGGTAAATGTAGAAAGGCTCTCAGATGG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               20-456, gnl|bosTau2|chr15 (5119820-5120259)
               

               
               20-456, gnl|Hg17|chr12 (17120833-17120405)
               

               
               20-456, gnl|Mm7|chr6 (138846372-138845961)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               20-456, gnl|bosTau2|chr15 (5119820-5120259)
               

               
               20-456, gnl|Hg17|chr12 (17120833-17120405)
               

               
               20-456, gnl|Mm7|chr6 (138846372-138845961)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ctl (0.153069)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ctl (0.153069)

	20-456, gnl\|bosTau2\|chr15 (5119820-5120259)
	20-456, gnl\|Hg17\|chr12 (17120833-17120405)
	20-456, gnl\|Mm7\|chr6 (138846372-138845961)