Non-Coding RNA Search

rpigcf0_002470.y1

Sequence:


               
               TGGCGCCATGTGCCAGGATGGCATCAACGGCTACTCATGCTTCTGTGTCCCGGGCTATCA
AGGCAGGCACTGCGACTTGGAAGTGGATGAGTGTGTGTCAGATCCCTGCAAGAACGAGGC
CACATGCCTCAATGAGATAGGAAGATACACCTGCCTTTGTCCCCACAATTACTCCGGTAA
GTGTGATTCCATTTGAGTCCCAGATGATGTAATTAGCATCCTCTTTAATGTGACAGAAGC
AGAAGTGACCTGTTCTCTCCTATCCAATTGCTTATGAAAATAGTCTTGACAAGAACTCAT
CAATAGATGGAAACCTTCCTAAACTACCAAAAACCTACTGAGCTTAAGCATTTGTATACT
GTCGCTGTGGTTGCATCCATTCCATTCCATTCCTTCCATTCCATTCCATTCCATTCCATT
CCATTCCATTCCATTCTATTCtttgctatttatggctgcacctgcaacatatggaagttc
ccaggctaggggtcgaattggagctgcagctgccagcctataccacagctcacagcaatg
ctggatccttagccctctg

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGGCGCCATGTGCCAGGATGGCATCAACGGCTACTCATGCTTCTGTGTCCCGGGCTATCA
AGGCAGGCACTGCGACTTGGAAGTGGATGAGTGTGTGTCAGATCCCTGCAAGAACGAGGC
CACATGCCTCAATGAGATAGGAAGATACACCTGCCTTTGTCCCCACAATTACTCCGGTAA
GTGTGATTCCATTTGAGTCCCAGATGATGTAATTAGCATCCTCTTTAATGTGACAGAAGC
AGAAGTGACCTGTTCTCTCCTATCCAATTGCTTATGAAAATAGTCTTGACAAGAACTCAT
CAATAGATGGAAACCTTCCTAAACTACCAAAAACCTACTGAGCTTAAGCATTTGTATACT
GTCGCTGTGGTTGCATCCATTCCATTCCATTCCTTCCATTCCATTCCATTCCATTCCATT
CCATTCCATTCCATTCTATTCtttgctatttatggctgcacctgcaacatatggaagttc
ccaggctaggggtcgaattggagctgcagctgccagcctataccacagctcacagcaatg
ctggatccttagccctctg

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               2-382, gnl|bosTau2|chr16 (55630418-55630045)
               

               
               2-382, gnl|Hg17|chr1 (194029616-194030014)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-382, gnl|bosTau2|chr16 (55630418-55630045)
               

               
               2-382, gnl|Hg17|chr1 (194029616-194030014)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ctl (0.153069)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ctl (0.153069)

	2-382, gnl\|bosTau2\|chr16 (55630418-55630045)
	2-382, gnl\|Hg17\|chr1 (194029616-194030014)