Non-Coding RNA Search

rpigcf0_002643.y1

Sequence:


               
               AAGTTCATGGGACAGGAGTTGAATCAGAGCTGTAGCTTCCAACCTACGCCAAAGCCACGT
Agatctgagtagcgtctgcgacctacgccacagcttatggcaataactgatccttaaccc
actgagggaggccagggatgcaacctgcatcctcatggatattagccaggttcttaaacc
actgaatcacaacaggaattccACATATATCAATGAATTTTAATGTTAGGTCTTATGCCA
CAATCATGTCTTATCTCCCCCATAAAATATTCTAATCAAATGGGCTAAAGTACACAGATA
TGACTTTTAAATTATTATACTATTCTGTTATTTTCTCTGGTCTACTATAGCTTTCATTTA
TATCCAACTGAATAGCAAGAATGTAAAACATTAATTTATATATGCATTCTTATCACTAAT
TTGCTATTTCTGTCTCATTATTTAAATTTCACATCCCTTAAGGGTACTGAATTGGTAAAA
AACAAACTTTTACTTCACTTTTTCTACTGTAAAGCACTGAATACATAGTAGTCATTTGAC
T

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAGTTCATGGGACAGGAGTTGAATCAGAGCTGTAGCTTCCAACCTACGCCAAAGCCACGT
Agatctgagtagcgtctgcgacctacgccacagcttatggcaataactgatccttaaccc
actgagggaggccagggatgcaacctgcatcctcatggatattagccaggttcttaaacc
actgaatcacaacaggaattccACATATATCAATGAATTTTAATGTTAGGTCTTATGCCA
CAATCATGTCTTATCTCCCCCATAAAATATTCTAATCAAATGGGCTAAAGTACACAGATA
TGACTTTTAAATTATTATACTATTCTGTTATTTTCTCTGGTCTACTATAGCTTTCATTTA
TATCCAACTGAATAGCAAGAATGTAAAACATTAATTTATATATGCATTCTTATCACTAAT
TTGCTATTTCTGTCTCATTATTTAAATTTCACATCCCTTAAGGGTACTGAATTGGTAAAA
AACAAACTTTTACTTCACTTTTTCTACTGTAAAGCACTGAATACATAGTAGTCATTTGAC
T

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               209-541, gnl|bosTau2|chr26 (11116216-11115885)
               

               
               209-541, gnl|Hg17|chr3 (86331307-86330928)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               209-541, gnl|bosTau2|chr26 (11116216-11115885)
               

               
               209-541, gnl|Hg17|chr3 (86331307-86330928)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ctl (0.153069)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ctl (0.153069)

	209-541, gnl\|bosTau2\|chr26 (11116216-11115885)
	209-541, gnl\|Hg17\|chr3 (86331307-86330928)