Non-Coding RNA Search

rpigcf0_002896.y1

Sequence:


               
               CTTTTCTCCTCGTCCCTCCTTCATTCATTCAAAGCCCCCCTGCCCCGCCCGCCTCAGCAT
TTCATTCATTCGTTCCTTCATTCATTCATTTCCCTGGTGCTAGGCTAGCGCACGCCCCTC
CAACCGAAGCCTACAGTGCGCAGGCGCAGGCCGAGAGAGGCATGCATCCTCCAATCGCTG
GGCGTCCTCCCGCCTCTAGGCGCCCGCCCGCTTCCCCATGAATGAACATTGACGTCAATT
GGGCGGGGCCATCCCACGTGACCCCTGATTTCCTCTTTATAAGGCGGCAGCGGCGCGGGC
GCTGTCCAGCGTGCTGAAGCCGGAGCGAGCTAGTCTCCCGGAGCCGCGCGGACCCAGCTG
AGCCCAGCCCACTGGACGCCAGACCTCGACCACCGCTCGTATCCTAGCCACCGCTCGGGG
CCCAGGAGGACGCGTCCCGAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTTTTCTCCTCGTCCCTCCTTCATTCATTCAAAGCCCCCCTGCCCCGCCCGCCTCAGCAT
TTCATTCATTCGTTCCTTCATTCATTCATTTCCCTGGTGCTAGGCTAGCGCACGCCCCTC
CAACCGAAGCCTACAGTGCGCAGGCGCAGGCCGAGAGAGGCATGCATCCTCCAATCGCTG
GGCGTCCTCCCGCCTCTAGGCGCCCGCCCGCTTCCCCATGAATGAACATTGACGTCAATT
GGGCGGGGCCATCCCACGTGACCCCTGATTTCCTCTTTATAAGGCGGCAGCGGCGCGGGC
GCTGTCCAGCGTGCTGAAGCCGGAGCGAGCTAGTCTCCCGGAGCCGCGCGGACCCAGCTG
AGCCCAGCCCACTGGACGCCAGACCTCGACCACCGCTCGTATCCTAGCCACCGCTCGGGG
CCCAGGAGGACGCGTCCCGAT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-441, gnl|bosTau2|chr25 (32793178-32792737)
               

               
               1-441, gnl|Hg17|chr7 (100402587-100402152)
               

               
               1-441, gnl|Mm7|chr5 (136000892-136001318)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-441, gnl|bosTau2|chr25 (32793178-32792737)
               

               
               1-441, gnl|Hg17|chr7 (100402587-100402152)
               

               
               1-441, gnl|Mm7|chr5 (136000892-136001318)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ctl (0.153069)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ctl (0.153069)

	1-441, gnl\|bosTau2\|chr25 (32793178-32792737)
	1-441, gnl\|Hg17\|chr7 (100402587-100402152)
	1-441, gnl\|Mm7\|chr5 (136000892-136001318)