Non-Coding RNA Search

rpigcf0_003055.y1

Sequence:


               
               CTGCAGGAATTCGAATTCTcaaaaaggtacacgcaccccaacgttcactgaatcagtatt
tgcaacagccaagacagggaagcaacctaaatttctatcaatagaggaatggataaagaa
gatatggtacatgtaaacaatggaatattactcagccataaaaaagaatgaaataatgtc
cACATGGATGGACCCAAGAGATTATCATATTAAGTGAAGAAAGTCAGCAAAGAAAGACAA
ATATATGTCTTACATGTAGAATCTAATAAAAATGATACAAAAGAATTTTTTATAAAGCAG
AAACAAACGCAGATTTCAAAATCAAACTTATGTTTACCAAAGGGGAAATGATGGGGGAGG
GATAAATTAGGAGGATGGGATTAACATATACACTGTACTATAAATAAAATAATAACTAAC
AAGGATCTCTTGTACAGCTCAGGGAAATCTACTCAATATTCTGTAATAACCTATATAATA
AAAAAGAAAGGATATACATATATGTATAACTGATTCACTTTTTTCAGTTAACTAATACAA
CATTGTAAGTCAACTATAATAAAGTTTTTAACTTAATCAAAAAAGAAAAGAGAAATCAGA
CATTTAAATTTGACAGGAAAACATAAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTGCAGGAATTCGAATTCTcaaaaaggtacacgcaccccaacgttcactgaatcagtatt
tgcaacagccaagacagggaagcaacctaaatttctatcaatagaggaatggataaagaa
gatatggtacatgtaaacaatggaatattactcagccataaaaaagaatgaaataatgtc
cACATGGATGGACCCAAGAGATTATCATATTAAGTGAAGAAAGTCAGCAAAGAAAGACAA
ATATATGTCTTACATGTAGAATCTAATAAAAATGATACAAAAGAATTTTTTATAAAGCAG
AAACAAACGCAGATTTCAAAATCAAACTTATGTTTACCAAAGGGGAAATGATGGGGGAGG
GATAAATTAGGAGGATGGGATTAACATATACACTGTACTATAAATAAAATAATAACTAAC
AAGGATCTCTTGTACAGCTCAGGGAAATCTACTCAATATTCTGTAATAACCTATATAATA
AAAAAGAAAGGATATACATATATGTATAACTGATTCACTTTTTTCAGTTAACTAATACAA
CATTGTAAGTCAACTATAATAAAGTTTTTAACTTAATCAAAAAAGAAAAGAGAAATCAGA
CATTTAAATTTGACAGGAAAACATAAG

Aligned organism(s): 1 entry(ies)

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Aligned organism(s): 1 entry(ies)

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               1-521, gnl|bosTau2|chr1 (56228865-56229382)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-521, gnl|bosTau2|chr1 (56228865-56229382)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ctl (0.153069)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ctl (0.153069)