Non-Coding RNA Search

rpigcf0_003096.y1

Sequence:


               
               AACAGACACTTAATAATTACTAAATAAATTATAGAAGGATATAGCAAGCATTCTCTACAG
AAGAATGTGTAAACACCACCCATAGAGATGGACTGATTTGCCTAAGTGTGTAGTTATTAG
AACCAGAAGGATTGTGGCTCTCCTAATCCATGTAGGACCAAAGTCCCAGAGTTTATTTCT
CTAGGTCCTGTGCTCCACATCCTCTCTCTCCACATTCAGAACATCAACAGTGCAGAAGCT
GTCCTAGAGTTCACTGGAATGTAGCAATGATTGGGACTCAGAGGGCCTTTCCTCAGTGGT
TGTTTGTAGGCCACAAAGGCAGCCATCTCCATGATTCCAAACAGGATGTATTGCAAACCA
AGAGATCTAATAAAATCTAGATGGTCAAGCAGTAATTGTGGAACAAATGGGAACTCAAAT
AGGAATGACCATAAAGGTGTCAGAGCAGTTTTCTGGCTTACGTCATAAACTTGCTCAGCA
CCAATATCAATGACTTCAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AACAGACACTTAATAATTACTAAATAAATTATAGAAGGATATAGCAAGCATTCTCTACAG
AAGAATGTGTAAACACCACCCATAGAGATGGACTGATTTGCCTAAGTGTGTAGTTATTAG
AACCAGAAGGATTGTGGCTCTCCTAATCCATGTAGGACCAAAGTCCCAGAGTTTATTTCT
CTAGGTCCTGTGCTCCACATCCTCTCTCTCCACATTCAGAACATCAACAGTGCAGAAGCT
GTCCTAGAGTTCACTGGAATGTAGCAATGATTGGGACTCAGAGGGCCTTTCCTCAGTGGT
TGTTTGTAGGCCACAAAGGCAGCCATCTCCATGATTCCAAACAGGATGTATTGCAAACCA
AGAGATCTAATAAAATCTAGATGGTCAAGCAGTAATTGTGGAACAAATGGGAACTCAAAT
AGGAATGACCATAAAGGTGTCAGAGCAGTTTTCTGGCTTACGTCATAAACTTGCTCAGCA
CCAATATCAATGACTTCAT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               276-498, gnl|bosTau2|chr22 (19998244-19998020)
               

               
               276-498, gnl|Hg17|chr3 (1304857-1305079)
               

               
               276-498, gnl|Mm7|chr6 (104810019-104810264)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               276-498, gnl|bosTau2|chr22 (19998244-19998020)
               

               
               276-498, gnl|Hg17|chr3 (1304857-1305079)
               

               
               276-498, gnl|Mm7|chr6 (104810019-104810264)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ctl (0.153069)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ctl (0.153069)

	276-498, gnl\|bosTau2\|chr22 (19998244-19998020)
	276-498, gnl\|Hg17\|chr3 (1304857-1305079)
	276-498, gnl\|Mm7\|chr6 (104810019-104810264)