Non-Coding RNA Search

rpigcf0_003255.y1

Sequence:


               
               AAGCATTTGATATTTAATATTCGCAGGAGTGCAATGCTGAAATGCCATTTTCCATTGATT
TGCATTCCGTGGAAGGGCGGCAGGAAGGCACAGCTGTCTTTTAAGAGGTCTCATAAACCC
ATCAATGTGGTTTTCGTGCCATTGTGGTATTTAGTGTTGTAACTGGTCTTAGTCATTTTA
TATGCCCAGATTCTGATGGGGCAACATATGCCACTTATTACTGGAATAGAAAACCTGAGT
TTAGTTCTACTCTTCAAGAACTTGTGTACTACTTCTGTAAAATCTTTATTTCCCAAATCC
ATACATTTCTTTTTTTTTATTTTTTTTattttccaactgtacagcaagggggtcaggtta
tccttacatgtatacattacaattacatttttcccccaccctttcttctgttgcaacatg
agtatctagacatagttctcaatgctattcagcaggatctccttgtaaatctattccaag
ttgtgtctgataagcccaagttcccgatccctcccactccctccccctcccatc

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAGCATTTGATATTTAATATTCGCAGGAGTGCAATGCTGAAATGCCATTTTCCATTGATT
TGCATTCCGTGGAAGGGCGGCAGGAAGGCACAGCTGTCTTTTAAGAGGTCTCATAAACCC
ATCAATGTGGTTTTCGTGCCATTGTGGTATTTAGTGTTGTAACTGGTCTTAGTCATTTTA
TATGCCCAGATTCTGATGGGGCAACATATGCCACTTATTACTGGAATAGAAAACCTGAGT
TTAGTTCTACTCTTCAAGAACTTGTGTACTACTTCTGTAAAATCTTTATTTCCCAAATCC
ATACATTTCTTTTTTTTTATTTTTTTTattttccaactgtacagcaagggggtcaggtta
tccttacatgtatacattacaattacatttttcccccaccctttcttctgttgcaacatg
agtatctagacatagttctcaatgctattcagcaggatctccttgtaaatctattccaag
ttgtgtctgataagcccaagttcccgatccctcccactccctccccctcccatc

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-308, gnl|bosTau2|chrX (33783655-33783963)
               

               
               1-308, gnl|Hg17|chrX (34901387-34902114)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-308, gnl|bosTau2|chrX (33783655-33783963)
               

               
               1-308, gnl|Hg17|chrX (34901387-34902114)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ctl (0.153069)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ctl (0.153069)

	1-308, gnl\|bosTau2\|chrX (33783655-33783963)
	1-308, gnl\|Hg17\|chrX (34901387-34902114)