Non-Coding RNA Search

rpigcf0_003359.y1

Sequence:


               
               CGAGAAAACACTACAAGCCAATACTGATGCTACACAAGCAAACAAATAAAACGATGCTTA
TATTAACAGTAAAGCATTCCATATCCAAGATAGTATTTTTAATGTTTATACATAATTTTA
TCGATAAATTCTAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CGAGAAAACACTACAAGCCAATACTGATGCTACACAAGCAAACAAATAAAACGATGCTTA
TATTAACAGTAAAGCATTCCATATCCAAGATAGTATTTTTAATGTTTATACATAATTTTA
TCGATAAATTCTAA

Aligned organism(s): 13 entry(ies)

More info

Aligned organism(s): 13 entry(ies)

Help | Less info


               
               12-134, gnl|bosTau2|chrX (91268-91390)
               

               
               12-134, gnl|canFam2|chrX (93269654-93269866)
               

               
               12-134, gnl|dasNov1|scaffold_85422 (226-4)
               

               
               12-134, gnl|echTel1|scaffold_321775 (93052-93253)
               

               
               12-134, gnl|hg17|chrX (116885998-116886209)
               

               
               12-134, gnl|Hg17|chrX (116886111-116886234)
               

               
               12-134, gnl|loxAfr1|scaffold_13028 (36981-37176)
               

               
               12-134, gnl|mm7|chrX (21715274-21715486)
               

               
               12-134, gnl|Mm7|chrX (21715385-21715504)
               

               
               12-134, gnl|monDom2|scaffold_146 (544006-544242)
               

               
               12-134, gnl|oryCun1|scaffold_183576 (26398-26600)
               

               
               12-134, gnl|rheMac2|chrX (116256072-116256283)
               

               
               12-134, gnl|rn3|chrX (10352979-10352767)

Aligned organism(s): 13 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               12-134, gnl|bosTau2|chrX (91268-91390)
               

               
               12-134, gnl|canFam2|chrX (93269654-93269866)
               

               
               12-134, gnl|dasNov1|scaffold_85422 (226-4)
               

               
               12-134, gnl|echTel1|scaffold_321775 (93052-93253)
               

               
               12-134, gnl|hg17|chrX (116885998-116886209)
               

               
               12-134, gnl|Hg17|chrX (116886111-116886234)
               

               
               12-134, gnl|loxAfr1|scaffold_13028 (36981-37176)
               

               
               12-134, gnl|mm7|chrX (21715274-21715486)
               

               
               12-134, gnl|Mm7|chrX (21715385-21715504)
               

               
               12-134, gnl|monDom2|scaffold_146 (544006-544242)
               

               
               12-134, gnl|oryCun1|scaffold_183576 (26398-26600)
               

               
               12-134, gnl|rheMac2|chrX (116256072-116256283)
               

               
               12-134, gnl|rn3|chrX (10352979-10352767)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               ctl (0.153069)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ctl (0.153069)

	12-134, gnl\|bosTau2\|chrX (91268-91390)
	12-134, gnl\|canFam2\|chrX (93269654-93269866)
	12-134, gnl\|dasNov1\|scaffold_85422 (226-4)
	12-134, gnl\|echTel1\|scaffold_321775 (93052-93253)
	12-134, gnl\|hg17\|chrX (116885998-116886209)
	12-134, gnl\|Hg17\|chrX (116886111-116886234)
	12-134, gnl\|loxAfr1\|scaffold_13028 (36981-37176)
	12-134, gnl\|mm7\|chrX (21715274-21715486)
	12-134, gnl\|Mm7\|chrX (21715385-21715504)
	12-134, gnl\|monDom2\|scaffold_146 (544006-544242)
	12-134, gnl\|oryCun1\|scaffold_183576 (26398-26600)
	12-134, gnl\|rheMac2\|chrX (116256072-116256283)
	12-134, gnl\|rn3\|chrX (10352979-10352767)