Non-Coding RNA Search

rpigcf0_003915.y1

Sequence:


               
               GGCTTGCTGTTAGATTGTAAGCTTCTTGAGGATAAGGATGCATGTTGTAGGTGCTCAAGT
ATTTATAATTTTTTTTTTGTATTGTTTAACTTTTGGTAGCTTTATAAATGTTGATAAATC
TATTATTCCATTGGCATTTGTAAGTTTTCAAAGTCTTGTATGCCTGATACCATAAACTTG
CCCCCCAATTTTTTTTGTGCCCTATAGCATTTGACAACTTTATTGGCTTCCTCTGATATG
CAAGTGGTGCTGGCAGTCCTTAACCTTCTGTATGTATTTAGCAAAAGATCAAACTACATC
ACACGCCTTGGATCTGACAAGAGAACCCCACTGCTAACCCGGCTGCAGCATTTGGCAGAG
GTGAGTCATGGATGAAGATTTGGAAGGGCATAAAAGTTGGACTGTATCATTCCTTTTCAC
AGGTGTTTTCTTAGTGTCAAAATGAATAGGAATCCCTATATTAACTTTACTGGCTTAGTT
GAGTAGAACTATGGGGGCCCATTTAGCTAAGCTCCAAAAGAAAAAAATC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGCTTGCTGTTAGATTGTAAGCTTCTTGAGGATAAGGATGCATGTTGTAGGTGCTCAAGT
ATTTATAATTTTTTTTTTGTATTGTTTAACTTTTGGTAGCTTTATAAATGTTGATAAATC
TATTATTCCATTGGCATTTGTAAGTTTTCAAAGTCTTGTATGCCTGATACCATAAACTTG
CCCCCCAATTTTTTTTGTGCCCTATAGCATTTGACAACTTTATTGGCTTCCTCTGATATG
CAAGTGGTGCTGGCAGTCCTTAACCTTCTGTATGTATTTAGCAAAAGATCAAACTACATC
ACACGCCTTGGATCTGACAAGAGAACCCCACTGCTAACCCGGCTGCAGCATTTGGCAGAG
GTGAGTCATGGATGAAGATTTGGAAGGGCATAAAAGTTGGACTGTATCATTCCTTTTCAC
AGGTGTTTTCTTAGTGTCAAAATGAATAGGAATCCCTATATTAACTTTACTGGCTTAGTT
GAGTAGAACTATGGGGGCCCATTTAGCTAAGCTCCAAAAGAAAAAAATC

Aligned organism(s): 4 entry(ies)

More info

Aligned organism(s): 4 entry(ies)

Help | Less info


               
               39-155, gnl|bosTau2|chrX (27012502-27012388)
               


               
               192-506, gnl|bosTau2|chrX (27012384-27012069)
               

               
               192-506, gnl|Hg17|chrX (53555452-53555134)
               

               
               192-506, gnl|Mm7|chrX (146601663-146601944)

Aligned organism(s): 4 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               39-155, gnl|bosTau2|chrX (27012502-27012388)
               


               
               192-506, gnl|bosTau2|chrX (27012384-27012069)
               

               
               192-506, gnl|Hg17|chrX (53555452-53555134)
               

               
               192-506, gnl|Mm7|chrX (146601663-146601944)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               ctl (0.153069)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ctl (0.153069)

	39-155, gnl\|bosTau2\|chrX (27012502-27012388)

	192-506, gnl\|bosTau2\|chrX (27012384-27012069)
	192-506, gnl\|Hg17\|chrX (53555452-53555134)
	192-506, gnl\|Mm7\|chrX (146601663-146601944)