Non-Coding RNA Search

rpigcf0_003934.y1

Sequence:


               
               ATGGAGAGATAAAGTCCCTAATGCTAGGTGTAGGTGAGCAGTGAGTAGCAAGAAGCAGGA
AACAGTATATCTGGGTGGGTGCTGAAAAGTTCAGCGTGGGCTGCTTTGCTTGGAGGATAG
CTCTCAAGGGTATATTTGCAGAAGCAAGTCAACTGGGACAAAAAAAAAAAGGCCCCTATG
CGTCTCCTTGACTATTCAGTGTGGTCAACCCTTTGCTCTTCCTTTGGCTGCTCCTTTTGG
CTCCTAGGCTCCAGAAAGCAAGGCCAGAGTGTTTTCTGCTTCCCCTCCCCCAAGGCAGTG
GACTGAGGCATGCTGGTAAGCTGCTATCCAATCAGACTGTCAAAAGCTGTAAATAAATGG
CCGCATATGCACAGTGAAGTAGGCTATGAGAAGAATCTAGATTGTATTACCACAGCCAGT
TGTGGAGACAGGGTGGGGGAGGAAGGAGAAAGAGGAGAGGGACGCCTAGTTGCCCTTCAA
GGAAATATTATCTTTTAAGCACACGTCTCCTAAGCATGACTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATGGAGAGATAAAGTCCCTAATGCTAGGTGTAGGTGAGCAGTGAGTAGCAAGAAGCAGGA
AACAGTATATCTGGGTGGGTGCTGAAAAGTTCAGCGTGGGCTGCTTTGCTTGGAGGATAG
CTCTCAAGGGTATATTTGCAGAAGCAAGTCAACTGGGACAAAAAAAAAAAGGCCCCTATG
CGTCTCCTTGACTATTCAGTGTGGTCAACCCTTTGCTCTTCCTTTGGCTGCTCCTTTTGG
CTCCTAGGCTCCAGAAAGCAAGGCCAGAGTGTTTTCTGCTTCCCCTCCCCCAAGGCAGTG
GACTGAGGCATGCTGGTAAGCTGCTATCCAATCAGACTGTCAAAAGCTGTAAATAAATGG
CCGCATATGCACAGTGAAGTAGGCTATGAGAAGAATCTAGATTGTATTACCACAGCCAGT
TGTGGAGACAGGGTGGGGGAGGAAGGAGAAAGAGGAGAGGGACGCCTAGTTGCCCTTCAA
GGAAATATTATCTTTTAAGCACACGTCTCCTAAGCATGACTG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               4-522, gnl|bosTau2|chr8 (28316961-28316435)
               

               
               4-522, gnl|Hg17|chr9 (35510871-35510334)
               

               
               4-522, gnl|Mm7|chr4 (43415289-43414776)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               4-522, gnl|bosTau2|chr8 (28316961-28316435)
               

               
               4-522, gnl|Hg17|chr9 (35510871-35510334)
               

               
               4-522, gnl|Mm7|chr4 (43415289-43414776)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ctl (0.153069)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ctl (0.153069)

	4-522, gnl\|bosTau2\|chr8 (28316961-28316435)
	4-522, gnl\|Hg17\|chr9 (35510871-35510334)
	4-522, gnl\|Mm7\|chr4 (43415289-43414776)