Non-Coding RNA Search

rpigcf0_003936.y1

Sequence:


               
               AAGAGCTGTGTAACCCAAACTATGCTAAAGAAGCTTTTTCACTTTCGCTGTGTCTAAGGC
GGTAATAACAGTGGTGCCTACATCATCTATCAAGTGCCATGAGCATAGGAAGTGCTTGGC
AAATCAGACTATGATTATTTTTGTTGCTTGGAGGTCATATGCCTGTTCCTTTTAAGGGGA
GGGGCATAAATTGCAGAAGCATTACCTGTAGGTGAGATTGTATTTCTTCCAGCCAGGGAG
AGTGTAACCATACTGACCCACATCAGGTACCCCACACCTGGGCATCTTCATGATCTCAAG
AGTGTTTGAGTCCAGTTTTCCAGTCACTGTCAATCCAAAAAACGCTTGCATTTCACGAAT
TTTCCCATCTATGAGACTCCTGTTCTTGCTTTGAACAAGATGACTCCCTTCTATTTCAAG
AGAGTAGAACTGGTTGAGATATGCCTGACCAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAGAGCTGTGTAACCCAAACTATGCTAAAGAAGCTTTTTCACTTTCGCTGTGTCTAAGGC
GGTAATAACAGTGGTGCCTACATCATCTATCAAGTGCCATGAGCATAGGAAGTGCTTGGC
AAATCAGACTATGATTATTTTTGTTGCTTGGAGGTCATATGCCTGTTCCTTTTAAGGGGA
GGGGCATAAATTGCAGAAGCATTACCTGTAGGTGAGATTGTATTTCTTCCAGCCAGGGAG
AGTGTAACCATACTGACCCACATCAGGTACCCCACACCTGGGCATCTTCATGATCTCAAG
AGTGTTTGAGTCCAGTTTTCCAGTCACTGTCAATCCAAAAAACGCTTGCATTTCACGAAT
TTTCCCATCTATGAGACTCCTGTTCTTGCTTTGAACAAGATGACTCCCTTCTATTTCAAG
AGAGTAGAACTGGTTGAGATATGCCTGACCAAAAAAAAAAAAAAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               87-465, gnl|bosTau2|chr15 (1194085-1193718)
               

               
               87-465, gnl|Hg17|chr11 (102080359-102080747)
               

               
               87-465, gnl|Mm7|chr9 (7570417-7570048)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               87-465, gnl|bosTau2|chr15 (1194085-1193718)
               

               
               87-465, gnl|Hg17|chr11 (102080359-102080747)
               

               
               87-465, gnl|Mm7|chr9 (7570417-7570048)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ctl (0.153069)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ctl (0.153069)

	87-465, gnl\|bosTau2\|chr15 (1194085-1193718)
	87-465, gnl\|Hg17\|chr11 (102080359-102080747)
	87-465, gnl\|Mm7\|chr9 (7570417-7570048)