Non-Coding RNA Search

rpigcf0_003981.y1

Sequence:


               
               AGAAATACCTCTTCCTTTAAGAGCAATTGCACTGACCCACTTACCTGGCATTGTCCATTT
GAGCTGAGCTTAGACAAACAGACAAGGACACCACCCAAGGGAGTTAAAAACAGGAAAAAG
GGTTGGGAACAGAGATTTAAAATTAATTCAGGTAAGCAGGGGTTTTTTAACCTACAGAGA
TTTTCAGAATCCTCTCCAAAACTATGGAAGTTGGGGGGGAGACAATTTTGCATCTCTTGC
TGCAATTTCCAGCAAACACTAACTTGATAAAGCACAGATTCCAGCTTTTGGATCTTTTGA
CAATCTCAATAGGGGTAGAGATCAAGGATTTCCCTACTGGCAATTTGCAAGTGAGGCTCT
CAGCTTTTTCTTTCAGAAGAGATGAGGGCAACGGCACGTAAAATTCCTTCCAAAAGAAAA
CAATAGGTAACTGTATTGAAGAAAGTGTTCCTTTGAGTTTCTGAGAATTAGTGAACTATT
TTTCTAGGTATTATTTCTGAAATATTCTTCCTCTCCCCTCCCCTTTTTCAGGCATGTATT
TATTTGTATCTTTTTCTTTCTATCTTTTTGGTTCTGTTTGTACTGAGGCTTCAAATACAG
AGCCAAGTCTTGTTTATTTCCTGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGAAATACCTCTTCCTTTAAGAGCAATTGCACTGACCCACTTACCTGGCATTGTCCATTT
GAGCTGAGCTTAGACAAACAGACAAGGACACCACCCAAGGGAGTTAAAAACAGGAAAAAG
GGTTGGGAACAGAGATTTAAAATTAATTCAGGTAAGCAGGGGTTTTTTAACCTACAGAGA
TTTTCAGAATCCTCTCCAAAACTATGGAAGTTGGGGGGGAGACAATTTTGCATCTCTTGC
TGCAATTTCCAGCAAACACTAACTTGATAAAGCACAGATTCCAGCTTTTGGATCTTTTGA
CAATCTCAATAGGGGTAGAGATCAAGGATTTCCCTACTGGCAATTTGCAAGTGAGGCTCT
CAGCTTTTTCTTTCAGAAGAGATGAGGGCAACGGCACGTAAAATTCCTTCCAAAAGAAAA
CAATAGGTAACTGTATTGAAGAAAGTGTTCCTTTGAGTTTCTGAGAATTAGTGAACTATT
TTTCTAGGTATTATTTCTGAAATATTCTTCCTCTCCCCTCCCCTTTTTCAGGCATGTATT
TATTTGTATCTTTTTCTTTCTATCTTTTTGGTTCTGTTTGTACTGAGGCTTCAAATACAG
AGCCAAGTCTTGTTTATTTCCTGC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-624, gnl|bosTau2|chr24 (2323550-2324170)
               

               
               1-624, gnl|Hg17|chr18 (71891918-71892549)
               

               
               1-624, gnl|Mm7|chr18 (83640091-83638824)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-624, gnl|bosTau2|chr24 (2323550-2324170)
               

               
               1-624, gnl|Hg17|chr18 (71891918-71892549)
               

               
               1-624, gnl|Mm7|chr18 (83640091-83638824)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ctl (0.153069)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ctl (0.153069)

	1-624, gnl\|bosTau2\|chr24 (2323550-2324170)
	1-624, gnl\|Hg17\|chr18 (71891918-71892549)
	1-624, gnl\|Mm7\|chr18 (83640091-83638824)