Non-Coding RNA Search

rpigcf0_004128.y1

Sequence:


               
               ATGATGTTGTGTTTCTGTGGACTACTCCGAAGTCAATTGGCTTATGTTTTGAGCGCTTAT
ATACTTCTTCAGTGTTTGAGAAAATAATGGTCATCTTTCTTGAGTGATATGCGTGATGTA
GATTTATGCCAGCAAAGTGTGTAAGATGTTGAGCCTTTGACTACCTGAAACTTCAGTTGT
TTTCCCATTAAAAACAAATATTTGTGGTTTAGCTTTGTTTCAAGTAAAGAATATGAAATA
ATATAGTTGGGAATTCATTCAAAACAGGAGAAAGGGAAAGGATTTCATATCCTTTGGATG
TCTTTTAGCACACCACAGCAAATTCATCTTGGGATTTATCTTTTAAGAGGACCTTATGGC
ATTTGGTAAATAAATATATTTCAGTAGGGTCTAAGGTGGGTGGAGCTGATATCAAATTCT
CTGTAAAAACAAGGACGGTTATAGCAGGGTTCCAGAGTAATAAGATTTTCAGATAAATCA
TATCCA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATGATGTTGTGTTTCTGTGGACTACTCCGAAGTCAATTGGCTTATGTTTTGAGCGCTTAT
ATACTTCTTCAGTGTTTGAGAAAATAATGGTCATCTTTCTTGAGTGATATGCGTGATGTA
GATTTATGCCAGCAAAGTGTGTAAGATGTTGAGCCTTTGACTACCTGAAACTTCAGTTGT
TTTCCCATTAAAAACAAATATTTGTGGTTTAGCTTTGTTTCAAGTAAAGAATATGAAATA
ATATAGTTGGGAATTCATTCAAAACAGGAGAAAGGGAAAGGATTTCATATCCTTTGGATG
TCTTTTAGCACACCACAGCAAATTCATCTTGGGATTTATCTTTTAAGAGGACCTTATGGC
ATTTGGTAAATAAATATATTTCAGTAGGGTCTAAGGTGGGTGGAGCTGATATCAAATTCT
CTGTAAAAACAAGGACGGTTATAGCAGGGTTCCAGAGTAATAAGATTTTCAGATAAATCA
TATCCA

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               1-479, gnl|bosTau2|chr22 (33997164-33997637)
               

               
               1-479, gnl|Hg17|chr3 (56000983-56000508)
               

               
               1-479, gnl|Mm7|chr14 (25473560-25474084)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-479, gnl|bosTau2|chr22 (33997164-33997637)
               

               
               1-479, gnl|Hg17|chr3 (56000983-56000508)
               

               
               1-479, gnl|Mm7|chr14 (25473560-25474084)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ctl (0.153069)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ctl (0.153069)

	1-479, gnl\|bosTau2\|chr22 (33997164-33997637)
	1-479, gnl\|Hg17\|chr3 (56000983-56000508)
	1-479, gnl\|Mm7\|chr14 (25473560-25474084)