Non-Coding RNA Search

rpigcf0_004226.y1

Sequence:


               
               CAATGTGGCACAATGGGATCAGTAATATCTCTGCAGCACCAGGACACAGGTTTGATCCCT
GACCCTGTACGGTGGGTTAAAGGATCGGGCATTACCACACGTGTGGCTTAAGTCACAACT
GTGGCTCAGATCTGACCCCTGGCCGAGGAGCTCCACATGCTATGGGGTGGCCAGAAAAGC
AAAAAGAAAAATGTCAGGATAGAAAGTCCAAAAATAAACTCCAAGCACCTATaatcaatt
tatgacaaaggaggcaagaatatacagcggaagactctctcttcaataagtggtactggg
aaaaccggacagctacatgtaaaagaatgaaattacaatattctctaacaccatacacaa
aaattagctaaaaatggattaaagacctaaacataaggccagatactCAACTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CAATGTGGCACAATGGGATCAGTAATATCTCTGCAGCACCAGGACACAGGTTTGATCCCT
GACCCTGTACGGTGGGTTAAAGGATCGGGCATTACCACACGTGTGGCTTAAGTCACAACT
GTGGCTCAGATCTGACCCCTGGCCGAGGAGCTCCACATGCTATGGGGTGGCCAGAAAAGC
AAAAAGAAAAATGTCAGGATAGAAAGTCCAAAAATAAACTCCAAGCACCTATaatcaatt
tatgacaaaggaggcaagaatatacagcggaagactctctcttcaataagtggtactggg
aaaaccggacagctacatgtaaaagaatgaaattacaatattctctaacaccatacacaa
aaattagctaaaaatggattaaagacctaaacataaggccagatactCAACTC

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               195-406, gnl|bosTau2|chr16 (18694671-18694457)
               


               
               199-403, gnl|bosTau2|chr2 (56798784-56798578)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               195-406, gnl|bosTau2|chr16 (18694671-18694457)
               


               
               199-403, gnl|bosTau2|chr2 (56798784-56798578)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ctl (0.153069)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ctl (0.153069)

	195-406, gnl\|bosTau2\|chr16 (18694671-18694457)

	199-403, gnl\|bosTau2\|chr2 (56798784-56798578)