Non-Coding RNA Search

rpigcf0_004264.y1

Sequence:


               
               ATTCCAAAGCCAGCCTCCAGGCTTGAAGGAGAAGGTCTCCGCTGGCCCACTCTCAGAACC
TGCCACCAGGCCTCTCCCTGCTGTGGATATCGAAGCTGTCCCTGCTTATTTACCCCCAGA
AGGGTTGGGCTTTTTCCCCTTTTTCTTGAGAGGTTTGGCATTGTCACCTGTATTTGTTTA
TCCCTTCTCTGAAAACTGCCAGTCTAAATTTGGATACCAGTGAGCCAGTATTGTTCCTCT
AGGGTGTCAAATAGGACAGGAAACACATAGCTGCACTGGAATTTGAAAAGGGAAGTAGTA
GGATGATGTCAACAAAGATTAGCTTGACCCTACAAGGCTGACTGCTGTGGTGATTAAAGG
TTCAGACCATAGAAGGAAGTGAGAGGGTGGTAAATGGAGAAGTCCCTTTCAGAGAACCCA
GACATCACTACCTGCCATCTCCCCTGGTTTGGTCTTTGTTCTCTTTGGCCTCTTTTTTCT
CTGTGTAAACCAGATTTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATTCCAAAGCCAGCCTCCAGGCTTGAAGGAGAAGGTCTCCGCTGGCCCACTCTCAGAACC
TGCCACCAGGCCTCTCCCTGCTGTGGATATCGAAGCTGTCCCTGCTTATTTACCCCCAGA
AGGGTTGGGCTTTTTCCCCTTTTTCTTGAGAGGTTTGGCATTGTCACCTGTATTTGTTTA
TCCCTTCTCTGAAAACTGCCAGTCTAAATTTGGATACCAGTGAGCCAGTATTGTTCCTCT
AGGGTGTCAAATAGGACAGGAAACACATAGCTGCACTGGAATTTGAAAAGGGAAGTAGTA
GGATGATGTCAACAAAGATTAGCTTGACCCTACAAGGCTGACTGCTGTGGTGATTAAAGG
TTCAGACCATAGAAGGAAGTGAGAGGGTGGTAAATGGAGAAGTCCCTTTCAGAGAACCCA
GACATCACTACCTGCCATCTCCCCTGGTTTGGTCTTTGTTCTCTTTGGCCTCTTTTTTCT
CTGTGTAAACCAGATTTC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               137-497, gnl|bosTau2|chr29 (5039710-5040078)
               

               
               137-497, gnl|Hg17|chr11 (85458428-85458803)
               

               
               137-497, gnl|Mm7|chr7 (86078081-86077706)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               137-497, gnl|bosTau2|chr29 (5039710-5040078)
               

               
               137-497, gnl|Hg17|chr11 (85458428-85458803)
               

               
               137-497, gnl|Mm7|chr7 (86078081-86077706)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ctl (0.153069)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ctl (0.153069)

	137-497, gnl\|bosTau2\|chr29 (5039710-5040078)
	137-497, gnl\|Hg17\|chr11 (85458428-85458803)
	137-497, gnl\|Mm7\|chr7 (86078081-86077706)