Non-Coding RNA Search

rpigcf0_004306.y1

Sequence:


               
               CGGGCTGCAGGAATCGAATTCGATAAATGTCAGAGCCTGGAGGGCCGTCTCAGAGTTTTG
ATCACTTACAGCTATTTCTCATTTCACATCATGGACAGATTCTAAGCCAACACCACTCAG
CACTGCTTGCTTAGTCAAATGCTTCAGGTCAGCGTACTAAATTTTAAGCCAATGGTCCGT
TAGCACTAGTTCTGGGTGCATCCCTAAGGCTAAGATGTTTGACCTGCCAGGCAGATGACT
TGAAATAGTCTGCAGATGCCCAAGTGGACATTAGTCAACTTTTGCAAAAAGTCTGCTTTT
TCATGGTGGAGGGGTGGTGTGGTATAAATGAATACACACACTTACACAGAGTCAAGGATT
TCAATTTTGACCCACTCTGTGACTTGGGGGTCTTCGTTTCCTTCTACATCTGTTTTCTCT
ATCTGTCAAAGAAAGATCTTAGCCTAAATCAGACATTCCAAATGTCCATGAAATGGCTAC
ATCAGAATTTTTTGGGGGCTTGTGAAAACGATAAACCCATTCCTAGAAGATTTGATTTAC
TAAGTCTAGTATGATGCCTAGGAATTTGCATTATTAGTAATTCATATTTCCCACCACCAC
CACTTTTAATTCTGATGTAAAGACAGGTCTGGAAATCACTAAATGACCTCTA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CGGGCTGCAGGAATCGAATTCGATAAATGTCAGAGCCTGGAGGGCCGTCTCAGAGTTTTG
ATCACTTACAGCTATTTCTCATTTCACATCATGGACAGATTCTAAGCCAACACCACTCAG
CACTGCTTGCTTAGTCAAATGCTTCAGGTCAGCGTACTAAATTTTAAGCCAATGGTCCGT
TAGCACTAGTTCTGGGTGCATCCCTAAGGCTAAGATGTTTGACCTGCCAGGCAGATGACT
TGAAATAGTCTGCAGATGCCCAAGTGGACATTAGTCAACTTTTGCAAAAAGTCTGCTTTT
TCATGGTGGAGGGGTGGTGTGGTATAAATGAATACACACACTTACACAGAGTCAAGGATT
TCAATTTTGACCCACTCTGTGACTTGGGGGTCTTCGTTTCCTTCTACATCTGTTTTCTCT
ATCTGTCAAAGAAAGATCTTAGCCTAAATCAGACATTCCAAATGTCCATGAAATGGCTAC
ATCAGAATTTTTTGGGGGCTTGTGAAAACGATAAACCCATTCCTAGAAGATTTGATTTAC
TAAGTCTAGTATGATGCCTAGGAATTTGCATTATTAGTAATTCATATTTCCCACCACCAC
CACTTTTAATTCTGATGTAAAGACAGGTCTGGAAATCACTAAATGACCTCTA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               22-652, gnl|bosTau2|chr11 (73011164-73011807)
               

               
               22-652, gnl|Hg17|chr9 (124526554-124527431)
               

               
               22-652, gnl|Mm7|chr2 (38852514-38853105)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               22-652, gnl|bosTau2|chr11 (73011164-73011807)
               

               
               22-652, gnl|Hg17|chr9 (124526554-124527431)
               

               
               22-652, gnl|Mm7|chr2 (38852514-38853105)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ctl (0.153069)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ctl (0.153069)

	22-652, gnl\|bosTau2\|chr11 (73011164-73011807)
	22-652, gnl\|Hg17\|chr9 (124526554-124527431)
	22-652, gnl\|Mm7\|chr2 (38852514-38853105)