Non-Coding RNA Search

rpigcf0_004387.y1

Sequence:


               
               ATGAGTCATTTAGTAAGAGCAAAATTATACTTCTCTTCCACCTCACTTAAAAGCTTACCT
TTTCAGTTTCTGTGCCAGAAATCTTCTTCCTCTATTCAAGATCATGCATTGTGAGTGGGA
AAGTTAATTCAAGAAAAGTTCCTTCCAGGAACAGGCAGGCATGTCACAGCACAGTGGTGC
TTATTACTTGCTCCATCTGGGTTAGTCGTGTGTAGTATCAATAGCTGTTCCTACGCTGCA
CTTGCAGCCGGGGACTTTTTATGTGGTCCTCCTGGAACAGACAGGGATCGGCCTGGAGTC
CATTCTGTGGTCTGCGATCTTCTGTCCAAAGTACCCATACCCATGAAGACCAAAAATTCC
TTTACCGGCAAAGTGTATCTCAATCCGGATAAAGAAATGAAATATTTATTTTAAAAAGTA
GTGATATTCTCTGGAACCATACTTATTATGACTATTAAGCCACAGACTAGGTATCAGACC
CCAATGAAAGACGTTTACTTCTATTACTTTATCCTATCTTCCCAAATATTATTTTCCCAA
CTTTCCTGAGGAAAAACTGAGGTGAGAGAGGCTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATGAGTCATTTAGTAAGAGCAAAATTATACTTCTCTTCCACCTCACTTAAAAGCTTACCT
TTTCAGTTTCTGTGCCAGAAATCTTCTTCCTCTATTCAAGATCATGCATTGTGAGTGGGA
AAGTTAATTCAAGAAAAGTTCCTTCCAGGAACAGGCAGGCATGTCACAGCACAGTGGTGC
TTATTACTTGCTCCATCTGGGTTAGTCGTGTGTAGTATCAATAGCTGTTCCTACGCTGCA
CTTGCAGCCGGGGACTTTTTATGTGGTCCTCCTGGAACAGACAGGGATCGGCCTGGAGTC
CATTCTGTGGTCTGCGATCTTCTGTCCAAAGTACCCATACCCATGAAGACCAAAAATTCC
TTTACCGGCAAAGTGTATCTCAATCCGGATAAAGAAATGAAATATTTATTTTAAAAAGTA
GTGATATTCTCTGGAACCATACTTATTATGACTATTAAGCCACAGACTAGGTATCAGACC
CCAATGAAAGACGTTTACTTCTATTACTTTATCCTATCTTCCCAAATATTATTTTCCCAA
CTTTCCTGAGGAAAAACTGAGGTGAGAGAGGCTC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               3-470, gnl|bosTau2|chr6 (42255424-42255882)
               

               
               3-470, gnl|Hg17|chr4 (61792951-61793399)
               

               
               3-470, gnl|Mm7|chr5 (80816565-80816940)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-470, gnl|bosTau2|chr6 (42255424-42255882)
               

               
               3-470, gnl|Hg17|chr4 (61792951-61793399)
               

               
               3-470, gnl|Mm7|chr5 (80816565-80816940)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ctl (0.153069)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ctl (0.153069)

	3-470, gnl\|bosTau2\|chr6 (42255424-42255882)
	3-470, gnl\|Hg17\|chr4 (61792951-61793399)
	3-470, gnl\|Mm7\|chr5 (80816565-80816940)