Non-Coding RNA Search

rpigcf0_004394.y1

Sequence:


               
               ATGTCTGTCTCGGTCACCACTGTACACCTCCTTTCCCAGCCACGGGCTTCTGGCACTCAA
TATTCATTTCAAAAGAATGAGTCTTTGGTTATCCTATTTGTTTTCCGAGAGCACCAGATA
TCAGAAGAAAGCCAAATTGCTAAAAATCAATATGCTGAAATAAACACTATACAGAATGAT
CAGTTTGCTAAAGCCAATTTGCCAAAAATCAATGGGCTAAATTTACCAAAACATTTTCTT
TTCTTATAAGTGTTGACAAAGTTAATGAAAATTCTTATTACACTGGGTGGTTTTTACCAG
CATTTGAAGATTTTAAGGAAGCCTTAGATGACTGTTCTTTCATTTCAAGAGCAGCATTTT
AGTGAATTTCATTGTTCGTTTTATTGAGGCAGTTAAGAATCAGAGTGATCTGGATTTCTA
CTGAATAGATTTCATATTAAGATAAATTGGATAATTTTCCCATCTTTTTTTTTTTTTATC
TCTTCTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATGTCTGTCTCGGTCACCACTGTACACCTCCTTTCCCAGCCACGGGCTTCTGGCACTCAA
TATTCATTTCAAAAGAATGAGTCTTTGGTTATCCTATTTGTTTTCCGAGAGCACCAGATA
TCAGAAGAAAGCCAAATTGCTAAAAATCAATATGCTGAAATAAACACTATACAGAATGAT
CAGTTTGCTAAAGCCAATTTGCCAAAAATCAATGGGCTAAATTTACCAAAACATTTTCTT
TTCTTATAAGTGTTGACAAAGTTAATGAAAATTCTTATTACACTGGGTGGTTTTTACCAG
CATTTGAAGATTTTAAGGAAGCCTTAGATGACTGTTCTTTCATTTCAAGAGCAGCATTTT
AGTGAATTTCATTGTTCGTTTTATTGAGGCAGTTAAGAATCAGAGTGATCTGGATTTCTA
CTGAATAGATTTCATATTAAGATAAATTGGATAATTTTCCCATCTTTTTTTTTTTTTATC
TCTTCTT

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               4-468, gnl|bosTau2|chr29 (862368-862818)
               

               
               4-468, gnl|Hg17|chr11 (92100159-92099702)
               

               
               4-468, gnl|Mm7|chr9 (15902737-15903189)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               4-468, gnl|bosTau2|chr29 (862368-862818)
               

               
               4-468, gnl|Hg17|chr11 (92100159-92099702)
               

               
               4-468, gnl|Mm7|chr9 (15902737-15903189)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               ctl (0.153069)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ctl (0.153069)

	4-468, gnl\|bosTau2\|chr29 (862368-862818)
	4-468, gnl\|Hg17\|chr11 (92100159-92099702)
	4-468, gnl\|Mm7\|chr9 (15902737-15903189)