Non-Coding RNA Search

rpigcf0_004626.y1

Sequence:


               
               GTACAAAATTCAAAGAAAACTTGACCCAGTTTATTTTTGTTTTTACTAAAATATCAAATA
CAATGTTTATCTTTGTAGGACGTCCAAGCATTCCAAAATAGAGTTTCCAAATATAGGTAT
ATTGTACTTGAAAACAGGCAGCATGATGTGCTTTAGTCAGAAAACAGTCAAGTGGGCAAA
CACAGTTTTGACTTCTAAATTTCTGCTTTAATTGCTGAAACTGTGTTGCCTTCAAAGCAG
ATATCAAGTAATATTTATTAAGTCTTCTGAAGTATTGGCATGTTAACAGTTGTGATTTTA
CCTTGTGCCTTTTGGTTCCTCAAACAATATTTGGCTACTTAATAAAGAATCTTATTAACA
GGCTAAATATACTTAAAAGACACATGTAGGAAAGAGCAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTACAAAATTCAAAGAAAACTTGACCCAGTTTATTTTTGTTTTTACTAAAATATCAAATA
CAATGTTTATCTTTGTAGGACGTCCAAGCATTCCAAAATAGAGTTTCCAAATATAGGTAT
ATTGTACTTGAAAACAGGCAGCATGATGTGCTTTAGTCAGAAAACAGTCAAGTGGGCAAA
CACAGTTTTGACTTCTAAATTTCTGCTTTAATTGCTGAAACTGTGTTGCCTTCAAAGCAG
ATATCAAGTAATATTTATTAAGTCTTCTGAAGTATTGGCATGTTAACAGTTGTGATTTTA
CCTTGTGCCTTTTGGTTCCTCAAACAATATTTGGCTACTTAATAAAGAATCTTATTAACA
GGCTAAATATACTTAAAAGACACATGTAGGAAAGAGCAC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               6-378, gnl|bosTau2|chr9 (27185885-27185517)
               

               
               6-378, gnl|Hg17|chr6 (102072075-102072435)
               

               
               6-378, gnl|Mm7|chr10 (49481165-49480828)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               6-378, gnl|bosTau2|chr9 (27185885-27185517)
               

               
               6-378, gnl|Hg17|chr6 (102072075-102072435)
               

               
               6-378, gnl|Mm7|chr10 (49481165-49480828)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ctl (0.153069)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ctl (0.153069)

	6-378, gnl\|bosTau2\|chr9 (27185885-27185517)
	6-378, gnl\|Hg17\|chr6 (102072075-102072435)
	6-378, gnl\|Mm7\|chr10 (49481165-49480828)