Non-Coding RNA Search

rpigcf0_004655.y1

Sequence:


               
               ATTCGGTAAAAGGATGCTTACCTGAAAGTGCCTGATGGCTGTGTTCTGTTGCCAGTCCTA
TCAGGCATTGCTCTGACAGGAATAATACCTGCCTTGGGGATAACATGGAAAGGCTCCATT
CGAAATCCTTTGTAAAGTTGAGGCTTGGATCCGGTGACTTCCCCACCACACCTATCCCTG
CAACAACACTGTGAGACAGGAATTATTAGCTCCTTTTGCGCTTCACCCAGAGTGACGAAC
CAGCTTGACAGTCACATTTTACTCGCATGAACTGATGATGGCTTCTATAAACAGCGCAAA
TAAAGATCACATTTCATGGCCTCTAGAGGATGGGATGGCAGAGAGCATATGGCCCCTTAG
GGGAAGTTAAGGACCTAATGAAAGGTTGTTGTATTAGTTTGGATTAGTTTTGGCTGTGAG
TGACAGCCATCCCTAAATAACAGTTGTTGGAATCAGAAGGATATTTATTTCTCATTCATA
TGAAGGTCCAGGTAGGTGGTCTACCATCTTTGGGGCCAAGTTCCTTCTATCTTCTTGCTC
TGCCAGCCTCCACATTGCAATTTCTAACTCATGGTCCAAAGTGGCTGCTATGGCTCCAAC
CATGAAGTCTATAGTCTTGGCAGCAGGAATGAGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATTCGGTAAAAGGATGCTTACCTGAAAGTGCCTGATGGCTGTGTTCTGTTGCCAGTCCTA
TCAGGCATTGCTCTGACAGGAATAATACCTGCCTTGGGGATAACATGGAAAGGCTCCATT
CGAAATCCTTTGTAAAGTTGAGGCTTGGATCCGGTGACTTCCCCACCACACCTATCCCTG
CAACAACACTGTGAGACAGGAATTATTAGCTCCTTTTGCGCTTCACCCAGAGTGACGAAC
CAGCTTGACAGTCACATTTTACTCGCATGAACTGATGATGGCTTCTATAAACAGCGCAAA
TAAAGATCACATTTCATGGCCTCTAGAGGATGGGATGGCAGAGAGCATATGGCCCCTTAG
GGGAAGTTAAGGACCTAATGAAAGGTTGTTGTATTAGTTTGGATTAGTTTTGGCTGTGAG
TGACAGCCATCCCTAAATAACAGTTGTTGGAATCAGAAGGATATTTATTTCTCATTCATA
TGAAGGTCCAGGTAGGTGGTCTACCATCTTTGGGGCCAAGTTCCTTCTATCTTCTTGCTC
TGCCAGCCTCCACATTGCAATTTCTAACTCATGGTCCAAAGTGGCTGCTATGGCTCCAAC
CATGAAGTCTATAGTCTTGGCAGCAGGAATGAGA

Aligned organism(s): 4 entry(ies)

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Aligned organism(s): 4 entry(ies)

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               5-219, gnl|bosTau2|chr16 (52338315-52338108)
               

               
               5-219, gnl|Hg17|chr1 (209896638-209896831)
               


               
               228-626, gnl|bosTau2|chr16 (52338078-52337684)
               

               
               228-626, gnl|Hg17|chr1 (209896861-209897255)

Aligned organism(s): 4 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               5-219, gnl|bosTau2|chr16 (52338315-52338108)
               

               
               5-219, gnl|Hg17|chr1 (209896638-209896831)
               


               
               228-626, gnl|bosTau2|chr16 (52338078-52337684)
               

               
               228-626, gnl|Hg17|chr1 (209896861-209897255)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ctl (0.153069)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ctl (0.153069)

	5-219, gnl\|bosTau2\|chr16 (52338315-52338108)
	5-219, gnl\|Hg17\|chr1 (209896638-209896831)

	228-626, gnl\|bosTau2\|chr16 (52338078-52337684)
	228-626, gnl\|Hg17\|chr1 (209896861-209897255)