Non-Coding RNA Search

rpigcf0_004910.y1

Sequence:


               
               CCCGGGCTGCAGGAATCGAATTCCAAATGGACATACCAGGAGGAAGAAAGCTCAAGAATA
TGGTAAAGTTTCAGATGTGATTCTGGATGTCATTTCAACCAAGTGAAGTGCTTTCTTTCT
TACCTTCCGACAGCTCTACATCTCTGCATGCCCTTTGCCCTAACCATATATTTTGCTATA
GCTAGTACTCCATAGCAAACCTCCAGCAATGTAAGTGGAACCGGGCAGGATGTTCTTTAT
GATTCAGAGAGTATAATTCACAGCAGGCAAATATTGGGCAAGGTATTACCTGGCAAGCCA
TGAAGACTATCCCGCTGCTGGCACTGGCAGACTATGGGGAGGTGGCCAAGGCTAGTGTGA
TTCAGAACAGATGACTACTATGATGAGAAGTTTGAGATGTAGAATGGAGAATCCAGTCTT
TCACTCTCCATGCTGGTCCAGGAAGCAAAGCCCTTGTGACCTACTAGAGAGCCAAGTAGG
TATCACGTCTCAAATAAAGAGATGATAGGGTCTTAGAGTACAGACCCATCGAAGGTCAAG
TCATCTTAAAACTGAATACAATAGTTCATAGATTACTTCCACA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCCGGGCTGCAGGAATCGAATTCCAAATGGACATACCAGGAGGAAGAAAGCTCAAGAATA
TGGTAAAGTTTCAGATGTGATTCTGGATGTCATTTCAACCAAGTGAAGTGCTTTCTTTCT
TACCTTCCGACAGCTCTACATCTCTGCATGCCCTTTGCCCTAACCATATATTTTGCTATA
GCTAGTACTCCATAGCAAACCTCCAGCAATGTAAGTGGAACCGGGCAGGATGTTCTTTAT
GATTCAGAGAGTATAATTCACAGCAGGCAAATATTGGGCAAGGTATTACCTGGCAAGCCA
TGAAGACTATCCCGCTGCTGGCACTGGCAGACTATGGGGAGGTGGCCAAGGCTAGTGTGA
TTCAGAACAGATGACTACTATGATGAGAAGTTTGAGATGTAGAATGGAGAATCCAGTCTT
TCACTCTCCATGCTGGTCCAGGAAGCAAAGCCCTTGTGACCTACTAGAGAGCCAAGTAGG
TATCACGTCTCAAATAAAGAGATGATAGGGTCTTAGAGTACAGACCCATCGAAGGTCAAG
TCATCTTAAAACTGAATACAATAGTTCATAGATTACTTCCACA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               26-547, gnl|bosTau2|chr14 (9478237-9478755)
               

               
               26-547, gnl|Hg17|chr8 (122348449-122347967)
               

               
               26-547, gnl|Mm7|chr15 (56413567-56413060)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               26-547, gnl|bosTau2|chr14 (9478237-9478755)
               

               
               26-547, gnl|Hg17|chr8 (122348449-122347967)
               

               
               26-547, gnl|Mm7|chr15 (56413567-56413060)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ctl (0.153069)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ctl (0.153069)

	26-547, gnl\|bosTau2\|chr14 (9478237-9478755)
	26-547, gnl\|Hg17\|chr8 (122348449-122347967)
	26-547, gnl\|Mm7\|chr15 (56413567-56413060)