Non-Coding RNA Search

rpigcf0_004931.y1

Sequence:


               
               TTCGAATTCGGAAGACAGAATTGTAACAGAGCAAAGATCAAAAGGTAACAAGTAGAGTTA
TCCTTCATTACCTCATTTGAGAAATTTGAAGAGTAGTACATCCTTGAAGAATAAAACCAA
GTCCTCTGGCCATTTAACAGGCCTGATATTTTTGCAACCATTTTGCTTCCAATAGGAAGT
AGCCACCTGAACTTCATTTTTTTACTACATGTTAGAAGAAGGTTTGTTGTAGAAGAGGAA
AATTATAAGCCTGAAGCCCTTAACAAGCTCTAGAAAAGCTCTCTTACCCATACACTAGGT
GCAATCCAGGCTGAATTTTTGCCTCTACTTGGGTGATTAATCATATGGTGAATCTGGTCT
CACTAGCTCTAATAACAGGGCTTGCTTTTGGCTTTTTTGTGGAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTCGAATTCGGAAGACAGAATTGTAACAGAGCAAAGATCAAAAGGTAACAAGTAGAGTTA
TCCTTCATTACCTCATTTGAGAAATTTGAAGAGTAGTACATCCTTGAAGAATAAAACCAA
GTCCTCTGGCCATTTAACAGGCCTGATATTTTTGCAACCATTTTGCTTCCAATAGGAAGT
AGCCACCTGAACTTCATTTTTTTACTACATGTTAGAAGAAGGTTTGTTGTAGAAGAGGAA
AATTATAAGCCTGAAGCCCTTAACAAGCTCTAGAAAAGCTCTCTTACCCATACACTAGGT
GCAATCCAGGCTGAATTTTTGCCTCTACTTGGGTGATTAATCATATGGTGAATCTGGTCT
CACTAGCTCTAATAACAGGGCTTGCTTTTGGCTTTTTTGTGGAC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               10-404, gnl|bosTau2|chr11 (84211716-84212110)
               

               
               10-404, gnl|Hg17|chr10 (54039331-54038928)
               

               
               10-404, gnl|Mm7|chr19 (30054112-30054472)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               10-404, gnl|bosTau2|chr11 (84211716-84212110)
               

               
               10-404, gnl|Hg17|chr10 (54039331-54038928)
               

               
               10-404, gnl|Mm7|chr19 (30054112-30054472)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ctl (0.153069)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ctl (0.153069)

	10-404, gnl\|bosTau2\|chr11 (84211716-84212110)
	10-404, gnl\|Hg17\|chr10 (54039331-54038928)
	10-404, gnl\|Mm7\|chr19 (30054112-30054472)