Non-Coding RNA Search

rpigcf0_006601.y1

Sequence:


               
               CAGGAATTCGAATTCGAATTTTCTTTTGCATTGCTTAAGTAATATTTTTTGAGCTGTAGC
TAAAGATAAATAGTATGGCTCACTCTATGCTGGACTGCTCAACAGAGACAATCACCGATG
TTAATAAAATCAGTATTTAAAAGAAAGCTTAGGGGATTTTAGGAAATGCATCCATACCCA
TAGAGTTGCAGCTGTTACACTGTAATAAATAACTTGGAGGCTGGTGGCTTGTCGCTAGCA
ACAGAAGGAAGCCACGCTGTAATGGTCAGCAACTGCCTGGAAAATGATTTTTTTCTTCAT
CTCGATTCTATCACCTTTGATGCTTTTGCTTTTAGTTTTAGAGGCTAACAAAGAGCTTTG
CATATCAAGTTATCAAATGTGTGTTTAAGGTTATTGAATCTGCCACAACAGTCTTAAAAA
TCTAACCCACATTTAGCCTCTCCTTGATGCCTAGCACAACCCTGCACCCCAACACCTCAC
CAGATTCTGCAGTGCACGTCGGAATTATTCCCAACCTGCTCAACACAGAGGACAGAGGCA
TTATGTTCTTGGCTGGATTCAGAATTGTAGTTCTCCTTTCTTCAATAAAGCAGTGAAACG
T

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CAGGAATTCGAATTCGAATTTTCTTTTGCATTGCTTAAGTAATATTTTTTGAGCTGTAGC
TAAAGATAAATAGTATGGCTCACTCTATGCTGGACTGCTCAACAGAGACAATCACCGATG
TTAATAAAATCAGTATTTAAAAGAAAGCTTAGGGGATTTTAGGAAATGCATCCATACCCA
TAGAGTTGCAGCTGTTACACTGTAATAAATAACTTGGAGGCTGGTGGCTTGTCGCTAGCA
ACAGAAGGAAGCCACGCTGTAATGGTCAGCAACTGCCTGGAAAATGATTTTTTTCTTCAT
CTCGATTCTATCACCTTTGATGCTTTTGCTTTTAGTTTTAGAGGCTAACAAAGAGCTTTG
CATATCAAGTTATCAAATGTGTGTTTAAGGTTATTGAATCTGCCACAACAGTCTTAAAAA
TCTAACCCACATTTAGCCTCTCCTTGATGCCTAGCACAACCCTGCACCCCAACACCTCAC
CAGATTCTGCAGTGCACGTCGGAATTATTCCCAACCTGCTCAACACAGAGGACAGAGGCA
TTATGTTCTTGGCTGGATTCAGAATTGTAGTTCTCCTTTCTTCAATAAAGCAGTGAAACG
T

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               20-599, gnl|bosTau2|chr11 (41179552-41178977)
               

               
               20-599, gnl|Hg17|chrX (41999524-41998941)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               20-599, gnl|bosTau2|chr11 (41179552-41178977)
               

               
               20-599, gnl|Hg17|chrX (41999524-41998941)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ctl (0.153069)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ctl (0.153069)

	20-599, gnl\|bosTau2\|chr11 (41179552-41178977)
	20-599, gnl\|Hg17\|chrX (41999524-41998941)