Non-Coding RNA Search

rpigcf0_016918.y1

Sequence:


               
               GGAATCGAATTGTCTAGTAATTAATTTAGAGATTGTCCCAAGCTAGCTACCAGTCTTCTT
CACCAATCATTTATTAGAAGCCTTCTCCCCGCTGTCCCAGCCAGGACAAGCATGTGTGTT
TATAAAGGTGAAAATACAAGTCCTAGGGAAAGGAACTGCTGCTGGATTTCTCTTCCTGAA
ATACCATTTCCAGGATGCTCCCCCTCTGCTCACAATTGTTTATGGCTCATCTTTCTGACA
TATCAATTAGGCATCATTTTAAATGGTTTCAAGATACTCCATTCTGGTCCCATTATGTGT
AGTAAAATGATTGTTCTCTGTTTGCATGACACCTTCTGCTATGGCCACTTTAGAAAGCCT
TTGCTGGTGCTGTTCCCTTGCCTGGACCGCCCTCTCAGCTGTTTCCTCTCACTGTTCAAG
CCCCGAGCAGGCTTCAGAACCCACCTCTTGATTCCCCTTCTACAGACATGCAGCTCTTCT
TGATTCAATCATCCTTCCTTGAGTCCATCACATCCCTCAGCACTTAGTGCCCTGAGACAA
ATTAGCCCTTTATTTCATAGGCACAACCTTCTGAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGAATCGAATTGTCTAGTAATTAATTTAGAGATTGTCCCAAGCTAGCTACCAGTCTTCTT
CACCAATCATTTATTAGAAGCCTTCTCCCCGCTGTCCCAGCCAGGACAAGCATGTGTGTT
TATAAAGGTGAAAATACAAGTCCTAGGGAAAGGAACTGCTGCTGGATTTCTCTTCCTGAA
ATACCATTTCCAGGATGCTCCCCCTCTGCTCACAATTGTTTATGGCTCATCTTTCTGACA
TATCAATTAGGCATCATTTTAAATGGTTTCAAGATACTCCATTCTGGTCCCATTATGTGT
AGTAAAATGATTGTTCTCTGTTTGCATGACACCTTCTGCTATGGCCACTTTAGAAAGCCT
TTGCTGGTGCTGTTCCCTTGCCTGGACCGCCCTCTCAGCTGTTTCCTCTCACTGTTCAAG
CCCCGAGCAGGCTTCAGAACCCACCTCTTGATTCCCCTTCTACAGACATGCAGCTCTTCT
TGATTCAATCATCCTTCCTTGAGTCCATCACATCCCTCAGCACTTAGTGCCCTGAGACAA
ATTAGCCCTTTATTTCATAGGCACAACCTTCTGAT

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               12-570, gnl|bosTau2|chr20 (8571525-8572086)
               

               
               12-570, gnl|Hg17|chr5 (65215122-65214580)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               12-570, gnl|bosTau2|chr20 (8571525-8572086)
               

               
               12-570, gnl|Hg17|chr5 (65215122-65214580)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ctl (0.153069)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ctl (0.153069)

	12-570, gnl\|bosTau2\|chr20 (8571525-8572086)
	12-570, gnl\|Hg17\|chr5 (65215122-65214580)