Non-Coding RNA Search

rpigcf0_017663.y1

Sequence:


               
               AGCATTGCCATGAACtgtaggtcgcagatgaggcttggatcccacattgctgtggctgtg
gcgtagaccagcagctgtagctctgatttgacccctagcctaggaatttccatatactgt
gggtgaggccctaaaaagCCAAAAAAAAAAAGAGAGAGAGAGAGAAATTGTTCAAAGACA
ATAAGCAAACGCTTAAAAATGAAACCAGCTCCTGGGGCGGTCACTTTGACAATGACATGG
CCTTTCAGTTTCAAGGCCAAGCATCTGCTTCCAGCGACATCTTCGGGCCCCTGGACCTCG
CGTTTACCTAACTAAATGTGCAAGGCTACGGTACCCAGCCCAAGGAGGTCACGTGAGCGA
CAGCAAACAGTCAACAGATGCATGCTATTTGTTTTGTTTTTAGTCTTTTCCTAGTTTTTC
ATAAACCACACTGTCATTTTGCTTATAGGCTCTTCCAAATTCACCTTCACTGAGGCATGT
TTCCTATGTTAGTTCAAGGCAAGGCTCTCTGATTATAGACACATATCTTAACTACGTCCC
AGCCTTTAAAAGCAACGCACAGTAACATTCACTAAGTCCTGCATCCTACACTGCTCTCTA
TGCTCATGCTGTTTTTCTCTGATCCTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGCATTGCCATGAACtgtaggtcgcagatgaggcttggatcccacattgctgtggctgtg
gcgtagaccagcagctgtagctctgatttgacccctagcctaggaatttccatatactgt
gggtgaggccctaaaaagCCAAAAAAAAAAAGAGAGAGAGAGAGAAATTGTTCAAAGACA
ATAAGCAAACGCTTAAAAATGAAACCAGCTCCTGGGGCGGTCACTTTGACAATGACATGG
CCTTTCAGTTTCAAGGCCAAGCATCTGCTTCCAGCGACATCTTCGGGCCCCTGGACCTCG
CGTTTACCTAACTAAATGTGCAAGGCTACGGTACCCAGCCCAAGGAGGTCACGTGAGCGA
CAGCAAACAGTCAACAGATGCATGCTATTTGTTTTGTTTTTAGTCTTTTCCTAGTTTTTC
ATAAACCACACTGTCATTTTGCTTATAGGCTCTTCCAAATTCACCTTCACTGAGGCATGT
TTCCTATGTTAGTTCAAGGCAAGGCTCTCTGATTATAGACACATATCTTAACTACGTCCC
AGCCTTTAAAAGCAACGCACAGTAACATTCACTAAGTCCTGCATCCTACACTGCTCTCTA
TGCTCATGCTGTTTTTCTCTGATCCTC

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               171-545, gnl|bosTau2|chr13 (26721476-26721101)
               

               
               171-545, gnl|Hg17|chr20 (22562367-22561979)
               

               
               171-545, gnl|Mm7|chr2 (147829937-147829622)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               171-545, gnl|bosTau2|chr13 (26721476-26721101)
               

               
               171-545, gnl|Hg17|chr20 (22562367-22561979)
               

               
               171-545, gnl|Mm7|chr2 (147829937-147829622)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               ctl (0.153069)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ctl (0.153069)

	171-545, gnl\|bosTau2\|chr13 (26721476-26721101)
	171-545, gnl\|Hg17\|chr20 (22562367-22561979)
	171-545, gnl\|Mm7\|chr2 (147829937-147829622)