Non-Coding RNA Search

rpigcf0_020589.y1

Sequence:


               
               ATTCGTCTATGGGTGAGCTGAAGTCATCAGATGGTCTGTTGGCCAAGTGAGGAAAGCACT
TCATGGCCAGCCTGCGTGCAGACAGCCATCTCAATGACCTTCTCCACTGTCTGTAGCCTC
ACTGCTATTTGCTACAAAAGGCACATTTGCACAGTTCTTTCCAACAAAATAGGGCTGTTT
GGTGTGGTTTACAAGCACCATTAAAACCAAAACCTTTGAACAGTTCTGTTTTTAGAACTT
AAATAGCTCCTGCCCCCCACCAGTCCTCATCTAAATCTGGTGGTAGATTTTTTTGGTTCT
GAAGGAAAAGATAACTCTTGAGTGCTTCAATCCCTAGATTTTGCAAATCTTCCCGGGAGT
CAACCCAGGAAATCACCTGGACTCAGAGGACCAGTGCTGGGTTGGCTTCCAGGACCAGTG
GACTCTATGTGGAGCTCAGATTGAGCTTGACTTCTGCTGTGTTGGCTGTAGGTGTGAACC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATTCGTCTATGGGTGAGCTGAAGTCATCAGATGGTCTGTTGGCCAAGTGAGGAAAGCACT
TCATGGCCAGCCTGCGTGCAGACAGCCATCTCAATGACCTTCTCCACTGTCTGTAGCCTC
ACTGCTATTTGCTACAAAAGGCACATTTGCACAGTTCTTTCCAACAAAATAGGGCTGTTT
GGTGTGGTTTACAAGCACCATTAAAACCAAAACCTTTGAACAGTTCTGTTTTTAGAACTT
AAATAGCTCCTGCCCCCCACCAGTCCTCATCTAAATCTGGTGGTAGATTTTTTTGGTTCT
GAAGGAAAAGATAACTCTTGAGTGCTTCAATCCCTAGATTTTGCAAATCTTCCCGGGAGT
CAACCCAGGAAATCACCTGGACTCAGAGGACCAGTGCTGGGTTGGCTTCCAGGACCAGTG
GACTCTATGTGGAGCTCAGATTGAGCTTGACTTCTGCTGTGTTGGCTGTAGGTGTGAACC

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               16-337, gnl|bosTau2|chr29 (16966404-16966084)
               

               
               16-337, gnl|Hg17|chr11 (20618278-20618595)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               16-337, gnl|bosTau2|chr29 (16966404-16966084)
               

               
               16-337, gnl|Hg17|chr11 (20618278-20618595)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ctl (0.153069)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ctl (0.153069)

	16-337, gnl\|bosTau2\|chr29 (16966404-16966084)
	16-337, gnl\|Hg17\|chr11 (20618278-20618595)