rplac_0730.y1
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| ATTTTTGTTCATTTATTTTTTTACTATACAGGTGACCATCCACGACAAGATAGCATGGAT TTCAGTAATGAATGGGGTGACCCCTCTAACTGTCGATGTGGTGATAGACTGAAACCATTA GAGCGGAGAGCTGCACGCCAGCACCAACGATGTCTAGCACATTCTTTGGTTGGGACTCCC AATTATATTGCACCTGAAGTGTTGTTACGAACAGGCTATACACAGTTATGTGATTGGTGG AGTGTTGGTGTCATTCTTTTTGAAATGTTGGTGGGACAACCTCCTTTCTTGGCACAAACA CCATTTGAAACACAAATGAAGGTAATCAACTGGCAAACATCTCTTCATATCCCACCACAA GCTAAACTGAGTCCTGAAGCCTCTGATCTTATTATTAAACTCTGCCGAGGACCAGAAGAT CGCTTAGG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| ATTTTTGTTCATTTATTTTTTTACTATACAGGTGACCATCCACGACAAGATAGCATGGAT TTCAGTAATGAATGGGGTGACCCCTCTAACTGTCGATGTGGTGATAGACTGAAACCATTA GAGCGGAGAGCTGCACGCCAGCACCAACGATGTCTAGCACATTCTTTGGTTGGGACTCCC AATTATATTGCACCTGAAGTGTTGTTACGAACAGGCTATACACAGTTATGTGATTGGTGG AGTGTTGGTGTCATTCTTTTTGAAATGTTGGTGGGACAACCTCCTTTCTTGGCACAAACA CCATTTGAAACACAAATGAAGGTAATCAACTGGCAAACATCTCTTCATATCCCACCACAA GCTAAACTGAGTCCTGAAGCCTCTGATCTTATTATTAAACTCTGCCGAGGACCAGAAGAT CGCTTAGG |
| Aligned organism(s): 54 entry(ies) | More info |
| Aligned organism(s): 54 entry(ies) | Help | Less info |
| 4-215, gnl|bosTau2|chr7 (68178966-68179178) | |
| 4-215, gnl|canFam2|chr1 (43480515-43480710) | |
| 4-215, gnl|canFam2|chr1 (43480516-43480710) | |
| 4-215, gnl|danRer3|chr20 (1654397-1654591) | |
| 4-215, gnl|danRer3|chr20 (1654398-1654600) | |
| 4-215, gnl|dasNov1|scaffold_59066 (10971-10776) | |
| 4-215, gnl|dasNov1|scaffold_59066 (10970-10776) | |
| 4-215, gnl|echTel1|scaffold_281840 (106485-106680) | |
| 4-215, gnl|echTel1|scaffold_281840 (106486-106680) | |
| 4-215, gnl|fr1|chrUn (177158784-177158977) | |
| 4-215, gnl|fr1|chrUn (78364008-78363808) | |
| 4-215, gnl|galGal2|chr1 (170655155-170654961) | |
| 4-215, gnl|galGal2|chr3 (47150837-47151030) | |
| 4-215, gnl|hg17|chr6 (150089799-150089994) | |
| 4-215, gnl|hg17|chr6 (150039379-150039573) | |
| 4-215, gnl|Hg17|chr6 (150090020-150089804) | |
| 4-215, gnl|loxAfr1|scaffold_10100 (21398-21203) | |
| 4-215, gnl|loxAfr1|scaffold_10100 (21397-21203) | |
| 4-215, gnl|mm7|chr10 (7410903-7410708) | |
| 4-215, gnl|mm7|chr10 (7410902-7410708) | |
| 4-215, gnl|Mm7|chr10 (7410700-7410896) | |
| 4-215, gnl|monDom2|scaffold_0 (56384088-56383893) | |
| 4-215, gnl|monDom2|scaffold_0 (56384087-56383893) | |
| 4-215, gnl|oryCun1|scaffold_208570 (84363-84565) | |
| 4-215, gnl|oryCun1|scaffold_208570 (84364-84565) | |
| 4-215, gnl|panTro1|chr5 (153517647-153517842) | |
| 4-215, gnl|panTro1|chr5 (153517648-153517842) | |
| 4-215, gnl|rheMac2|chr4 (113612267-113612072) | |
| 4-215, gnl|rheMac2|chr4 (113612266-113612072) | |
| 4-215, gnl|rn3|chr1 (2380702-2380507) | |
| 4-215, gnl|rn3|chr1 (2380701-2380507) | |
| 4-215, gnl|tetNig1|chr14 (1861195-1861387) | |
| 4-215, gnl|tetNig1|chr2 (17651041-17650850) | |
| 4-215, gnl|xenTro1|scaffold_1979 (10509-10704) | |
| 4-215, gnl|xenTro1|scaffold_1979 (10510-10704) | |
| 319-428, gnl|bosTau2|chr7 (68181063-68181172) | |
| 319-428, gnl|canFam2|chr1 (43475193-43475347) | |
| 319-428, gnl|danRer3|chr20 (1652064-1652229) | |
| 319-428, gnl|dasNov1|scaffold_47866 (8152-8306) | |
| 319-428, gnl|echTel1|scaffold_281840 (103096-103250) | |
| 319-428, gnl|fr1|chrUn (177158240-177158391) | |
| 319-428, gnl|galGal2|chr3 (47149380-47149534) | |
| 319-428, gnl|hg17|chr6 (150024919-150025073) | |
| 319-428, gnl|Hg17|chr6 (150025070-150024961) | |
| 319-428, gnl|loxAfr1|scaffold_10100 (23794-23640) | |
| 319-428, gnl|mm7|chr10 (7412899-7412745) | |
| 319-428, gnl|Mm7|chr10 (7412746-7412855) | |
| 319-428, gnl|monDom2|scaffold_0 (56387080-56386926) | |
| 319-428, gnl|oryCun1|scaffold_178867 (12951-12802) | |
| 319-428, gnl|panTro1|chr5 (153492223-153492377) | |
| 319-428, gnl|rheMac2|chr4 (113623868-113623714) | |
| 319-428, gnl|rn3|chr1 (2382437-2382283) | |
| 319-428, gnl|tetNig1|chr14 (1860746-1860897) | |
| 319-428, gnl|xenTro1|scaffold_952 (209835-209681) |
| Aligned organism(s): 54 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 4-215, gnl|bosTau2|chr7 (68178966-68179178) | |
| 4-215, gnl|canFam2|chr1 (43480515-43480710) | |
| 4-215, gnl|canFam2|chr1 (43480516-43480710) | |
| 4-215, gnl|danRer3|chr20 (1654397-1654591) | |
| 4-215, gnl|danRer3|chr20 (1654398-1654600) | |
| 4-215, gnl|dasNov1|scaffold_59066 (10971-10776) | |
| 4-215, gnl|dasNov1|scaffold_59066 (10970-10776) | |
| 4-215, gnl|echTel1|scaffold_281840 (106485-106680) | |
| 4-215, gnl|echTel1|scaffold_281840 (106486-106680) | |
| 4-215, gnl|fr1|chrUn (177158784-177158977) | |
| 4-215, gnl|fr1|chrUn (78364008-78363808) | |
| 4-215, gnl|galGal2|chr1 (170655155-170654961) | |
| 4-215, gnl|galGal2|chr3 (47150837-47151030) | |
| 4-215, gnl|hg17|chr6 (150089799-150089994) | |
| 4-215, gnl|hg17|chr6 (150039379-150039573) | |
| 4-215, gnl|Hg17|chr6 (150090020-150089804) | |
| 4-215, gnl|loxAfr1|scaffold_10100 (21398-21203) | |
| 4-215, gnl|loxAfr1|scaffold_10100 (21397-21203) | |
| 4-215, gnl|mm7|chr10 (7410903-7410708) | |
| 4-215, gnl|mm7|chr10 (7410902-7410708) | |
| 4-215, gnl|Mm7|chr10 (7410700-7410896) | |
| 4-215, gnl|monDom2|scaffold_0 (56384088-56383893) | |
| 4-215, gnl|monDom2|scaffold_0 (56384087-56383893) | |
| 4-215, gnl|oryCun1|scaffold_208570 (84363-84565) | |
| 4-215, gnl|oryCun1|scaffold_208570 (84364-84565) | |
| 4-215, gnl|panTro1|chr5 (153517647-153517842) | |
| 4-215, gnl|panTro1|chr5 (153517648-153517842) | |
| 4-215, gnl|rheMac2|chr4 (113612267-113612072) | |
| 4-215, gnl|rheMac2|chr4 (113612266-113612072) | |
| 4-215, gnl|rn3|chr1 (2380702-2380507) | |
| 4-215, gnl|rn3|chr1 (2380701-2380507) | |
| 4-215, gnl|tetNig1|chr14 (1861195-1861387) | |
| 4-215, gnl|tetNig1|chr2 (17651041-17650850) | |
| 4-215, gnl|xenTro1|scaffold_1979 (10509-10704) | |
| 4-215, gnl|xenTro1|scaffold_1979 (10510-10704) | |
| 319-428, gnl|bosTau2|chr7 (68181063-68181172) | |
| 319-428, gnl|canFam2|chr1 (43475193-43475347) | |
| 319-428, gnl|danRer3|chr20 (1652064-1652229) | |
| 319-428, gnl|dasNov1|scaffold_47866 (8152-8306) | |
| 319-428, gnl|echTel1|scaffold_281840 (103096-103250) | |
| 319-428, gnl|fr1|chrUn (177158240-177158391) | |
| 319-428, gnl|galGal2|chr3 (47149380-47149534) | |
| 319-428, gnl|hg17|chr6 (150024919-150025073) | |
| 319-428, gnl|Hg17|chr6 (150025070-150024961) | |
| 319-428, gnl|loxAfr1|scaffold_10100 (23794-23640) | |
| 319-428, gnl|mm7|chr10 (7412899-7412745) | |
| 319-428, gnl|Mm7|chr10 (7412746-7412855) | |
| 319-428, gnl|monDom2|scaffold_0 (56387080-56386926) | |
| 319-428, gnl|oryCun1|scaffold_178867 (12951-12802) | |
| 319-428, gnl|panTro1|chr5 (153492223-153492377) | |
| 319-428, gnl|rheMac2|chr4 (113623868-113623714) | |
| 319-428, gnl|rn3|chr1 (2382437-2382283) | |
| 319-428, gnl|tetNig1|chr14 (1860746-1860897) | |
| 319-428, gnl|xenTro1|scaffold_952 (209835-209681) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| pla (0.133672) |