Non-Coding RNA Search

rplac_10364.y1

Sequence:


               
               TGTTATTTTTGTCGCCCTTCCTTCCTTTGGAAAACAATCTCACAGCAATCTCTGAGACTC
TGGTCTGAGTGTCAATTATTTTTCTCCTTCGGGTATTTCTGTCTCAAGGGGTAGACGTGG
TTAGGAAGCCTCTGTCCTTTGTAAGCCTGCATTTTCAGTGGGCTATTTTTAGGAGCCTAT
CTGACAGTGACACATCCGCCTCACAGTTACAAACCAACACACTTAGGCTACAGCAGACGC
CTGGATTCCCGGTGTCAAGTCCCTCCCACCGTCGCCCCCCACCAGATTCACTTTATCTTG
TCGCGGATCAGACGGGAAATTTATCAGATGACACTGAGGATAATTGCAAGGAAGTTGAAG
TTGGCTGTCCCCAGATCATCCGTCTTTGCTCTGGGGGATTTTGTTAAAGCTCTTTGCACC
TGGTAGCAGTGTCCTCTTTTCGGCTGACCATTTGGGCACGAGTCAAAAGACGTACAGCGA
CTTAGGAAGATGGCCACGGTCAAGGTGCTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGTTATTTTTGTCGCCCTTCCTTCCTTTGGAAAACAATCTCACAGCAATCTCTGAGACTC
TGGTCTGAGTGTCAATTATTTTTCTCCTTCGGGTATTTCTGTCTCAAGGGGTAGACGTGG
TTAGGAAGCCTCTGTCCTTTGTAAGCCTGCATTTTCAGTGGGCTATTTTTAGGAGCCTAT
CTGACAGTGACACATCCGCCTCACAGTTACAAACCAACACACTTAGGCTACAGCAGACGC
CTGGATTCCCGGTGTCAAGTCCCTCCCACCGTCGCCCCCCACCAGATTCACTTTATCTTG
TCGCGGATCAGACGGGAAATTTATCAGATGACACTGAGGATAATTGCAAGGAAGTTGAAG
TTGGCTGTCCCCAGATCATCCGTCTTTGCTCTGGGGGATTTTGTTAAAGCTCTTTGCACC
TGGTAGCAGTGTCCTCTTTTCGGCTGACCATTTGGGCACGAGTCAAAAGACGTACAGCGA
CTTAGGAAGATGGCCACGGTCAAGGTGCTG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-509, gnl|bosTau2|chr19 (25798098-25798640)
               

               
               1-509, gnl|Hg17|chr17 (12610198-12610753)
               

               
               1-509, gnl|Mm7|chr11 (65257402-65256911)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-509, gnl|bosTau2|chr19 (25798098-25798640)
               

               
               1-509, gnl|Hg17|chr17 (12610198-12610753)
               

               
               1-509, gnl|Mm7|chr11 (65257402-65256911)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               pla (0.133672)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pla (0.133672)

	1-509, gnl\|bosTau2\|chr19 (25798098-25798640)
	1-509, gnl\|Hg17\|chr17 (12610198-12610753)
	1-509, gnl\|Mm7\|chr11 (65257402-65256911)