rplac_12319.y1
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| ACTGTTGGATGGCTTTTTCATCCGCCCATTTTACAAGATGATGCTGCACAAGCCAATAAC GCTTCATGATATGGAATCAGTGGATGGTGAGTATTACAATTCACTAAGATGGATTCTTGA AAATGATCCAACAGAACTGGACCTCAGGTTTGTCATAGATGAAGAGCTTTTTGGACAGAC ACATCAACATGAGTTGAAAAATGGTGGATCAGAAATAGTTGTCACCAATAAGAACAAAAA GGAATATATTTATCTTGTAATACAATGGCGATTTGTAAACCGAATCCAGAAGCAAATGGC TGCTTTTAAGGAGGGATTTTTTGAACTGATTCCACAGGATCTCATCAAAATTTTTGATGA AAATGAACTAGAGCTTCTCATGTGTGGATTGGGAGATGTCGACGTGAATGACTGGAGAGA ACACACAAAGTACAAAAATGGCTACAGTGTAAATCATCAAGTCATCCAGTGGTTTTGGAA GGCTGTTTTAATGATGGATTCAGAAAAACGAATAAGGTTACTTCAGTTTGTCACTGGTAC ATCC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| ACTGTTGGATGGCTTTTTCATCCGCCCATTTTACAAGATGATGCTGCACAAGCCAATAAC GCTTCATGATATGGAATCAGTGGATGGTGAGTATTACAATTCACTAAGATGGATTCTTGA AAATGATCCAACAGAACTGGACCTCAGGTTTGTCATAGATGAAGAGCTTTTTGGACAGAC ACATCAACATGAGTTGAAAAATGGTGGATCAGAAATAGTTGTCACCAATAAGAACAAAAA GGAATATATTTATCTTGTAATACAATGGCGATTTGTAAACCGAATCCAGAAGCAAATGGC TGCTTTTAAGGAGGGATTTTTTGAACTGATTCCACAGGATCTCATCAAAATTTTTGATGA AAATGAACTAGAGCTTCTCATGTGTGGATTGGGAGATGTCGACGTGAATGACTGGAGAGA ACACACAAAGTACAAAAATGGCTACAGTGTAAATCATCAAGTCATCCAGTGGTTTTGGAA GGCTGTTTTAATGATGGATTCAGAAAAACGAATAAGGTTACTTCAGTTTGTCACTGGTAC ATCC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 257-544, gnl|bosTau2|chr26 (12262784-12263068) | |
| 257-544, gnl|Hg17|chr18 (54203742-54208920) | |
| 257-544, gnl|Mm7|chr18_random (1500586-1498913) | |
| 372-482, gnl|bosTau2|chr10 (39169671-39169561) | |
| 372-482, gnl|canFam2|chr30 (24120048-24120182) | |
| 372-482, gnl|danRer3|chr13 (5092938-5093070) | |
| 372-482, gnl|dasNov1|scaffold_51038 (11140-11006) | |
| 372-482, gnl|echTel1|scaffold_238780 (3506-3385) | |
| 372-482, gnl|fr1|chrUn (230779388-230779244) | |
| 372-482, gnl|galGal2|chr10 (8296088-8295956) | |
| 372-482, gnl|hg17|chr15 (53913507-53913641) | |
| 372-482, gnl|Hg17|chr15 (53913637-53913527) | |
| 372-482, gnl|loxAfr1|scaffold_23130 (53169-53302) | |
| 372-482, gnl|mm7|chr9 (72775395-72775273) | |
| 372-482, gnl|Mm7|chr9 (72775275-72775385) | |
| 372-482, gnl|monDom2|scaffold_12 (33436471-33436606) | |
| 372-482, gnl|oryCun1|scaffold_175465 (590-724) | |
| 372-482, gnl|panTro1|chr16 (54259807-54259941) | |
| 372-482, gnl|rheMac2|chr7 (34154405-34154539) | |
| 372-482, gnl|rn3|chr8 (77349549-77349426) | |
| 372-482, gnl|tetNig1|chr5 (5290605-5290750) | |
| 372-482, gnl|xenTro1|scaffold_685 (136757-136901) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 257-544, gnl|bosTau2|chr26 (12262784-12263068) | |
| 257-544, gnl|Hg17|chr18 (54203742-54208920) | |
| 257-544, gnl|Mm7|chr18_random (1500586-1498913) | |
| 372-482, gnl|bosTau2|chr10 (39169671-39169561) | |
| 372-482, gnl|canFam2|chr30 (24120048-24120182) | |
| 372-482, gnl|danRer3|chr13 (5092938-5093070) | |
| 372-482, gnl|dasNov1|scaffold_51038 (11140-11006) | |
| 372-482, gnl|echTel1|scaffold_238780 (3506-3385) | |
| 372-482, gnl|fr1|chrUn (230779388-230779244) | |
| 372-482, gnl|galGal2|chr10 (8296088-8295956) | |
| 372-482, gnl|hg17|chr15 (53913507-53913641) | |
| 372-482, gnl|Hg17|chr15 (53913637-53913527) | |
| 372-482, gnl|loxAfr1|scaffold_23130 (53169-53302) | |
| 372-482, gnl|mm7|chr9 (72775395-72775273) | |
| 372-482, gnl|Mm7|chr9 (72775275-72775385) | |
| 372-482, gnl|monDom2|scaffold_12 (33436471-33436606) | |
| 372-482, gnl|oryCun1|scaffold_175465 (590-724) | |
| 372-482, gnl|panTro1|chr16 (54259807-54259941) | |
| 372-482, gnl|rheMac2|chr7 (34154405-34154539) | |
| 372-482, gnl|rn3|chr8 (77349549-77349426) | |
| 372-482, gnl|tetNig1|chr5 (5290605-5290750) | |
| 372-482, gnl|xenTro1|scaffold_685 (136757-136901) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| pla (0.133672) |