rplac_12540.y1
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GAGGGCTCCCCTGACTCCACCTCCAACGTCCGCATTGAGGAGAAGCACGTCCGGAGGAGC TCGGTGAAAAAGATCGAGAAGATGAAGGAAAAGCGCCAAGCCAAGTACACGGAGAATAAG CTGAAGGCCATTAAAGCCCGGAATGAGTACTTACTGGCTTTAGAAGCAACCAATGCATCT GTCTTCAAGTACTACATCCACGACCTGTCTGACCTTATTGATTGTTGTGACCTAGGCTAC CACGCTAGCCTGAACCGGGCGCTACGCACCTTCCTGTCCGCTGAGCTGAATCTGGAGCAG TCAAAGCACGAGGGTCTAGATGCCATAGAGAACGCTGTAGAAAACCTGGACGCCACCAGC GACAAGCAGCGCCTCATGGAGATGTACAACAATGTCTTCTGCCCACCTATGAAGTTTGAG TTCCAGACACCAAGTCCCAAAGACTACAGACCTCTTTCCGCCAG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GAGGGCTCCCCTGACTCCACCTCCAACGTCCGCATTGAGGAGAAGCACGTCCGGAGGAGC TCGGTGAAAAAGATCGAGAAGATGAAGGAAAAGCGCCAAGCCAAGTACACGGAGAATAAG CTGAAGGCCATTAAAGCCCGGAATGAGTACTTACTGGCTTTAGAAGCAACCAATGCATCT GTCTTCAAGTACTACATCCACGACCTGTCTGACCTTATTGATTGTTGTGACCTAGGCTAC CACGCTAGCCTGAACCGGGCGCTACGCACCTTCCTGTCCGCTGAGCTGAATCTGGAGCAG TCAAAGCACGAGGGTCTAGATGCCATAGAGAACGCTGTAGAAAACCTGGACGCCACCAGC GACAAGCAGCGCCTCATGGAGATGTACAACAATGTCTTCTGCCCACCTATGAAGTTTGAG TTCCAGACACCAAGTCCCAAAGACTACAGACCTCTTTCCGCCAG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 38 entry(ies) | More info |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
| 92-222, gnl|bosTau2|chr16 (1056562-1056692) | |
| 92-222, gnl|canFam2|chr38 (5671961-5672120) | |
| 92-222, gnl|danRer3|chr11 (23353541-23353376) | |
| 92-222, gnl|dasNov1|scaffold_28772 (7080-7240) | |
| 92-222, gnl|echTel1|scaffold_208163 (4670-4828) | |
| 92-222, gnl|fr1|chrUn (198938369-198938528) | |
| 92-222, gnl|galGal2|chr26 (1030490-1030653) | |
| 92-222, gnl|hg17|chr1 (120728708-120728867) | |
| 92-222, gnl|Hg17|chr1 (202955293-202955423) | |
| 92-222, gnl|loxAfr1|scaffold_54743 (5518-5677) | |
| 92-222, gnl|mm7|chr1 (131259441-131259282) | |
| 92-222, gnl|Mm7|chr1 (131259420-131259290) | |
| 92-222, gnl|monDom2|scaffold_13 (8346960-8347120) | |
| 92-222, gnl|oryCun1|scaffold_206495 (105181-105337) | |
| 92-222, gnl|panTro1|chr1 (186538856-186539015) | |
| 92-222, gnl|rheMac2|chr1 (163968547-163968388) | |
| 92-222, gnl|rn3|chr13 (44307483-44307324) | |
| 92-222, gnl|tetNig1|chr11 (8859814-8859957) | |
| 92-222, gnl|xenTro1|scaffold_736 (557628-557480) | |
| 223-426, gnl|bosTau2|chr16 (4158760-4158963) | |
| 223-426, gnl|canFam2|chr38 (5680010-5680248) | |
| 223-426, gnl|danRer3|chr11 (23351800-23351561) | |
| 223-426, gnl|dasNov1|scaffold_292873 (829-596) | |
| 223-426, gnl|echTel1|scaffold_240447 (3833-3595) | |
| 223-426, gnl|fr1|chrUn (198939899-198940134) | |
| 223-426, gnl|galGal2|chr26 (1034723-1034961) | |
| 223-426, gnl|hg17|chr1 (120736596-120736834) | |
| 223-426, gnl|Hg17|chr1 (202963176-202963379) | |
| 223-426, gnl|loxAfr1|scaffold_5535 (15524-15296) | |
| 223-426, gnl|mm7|chr1 (131253465-131253227) | |
| 223-426, gnl|Mm7|chr1 (131253452-131253249) | |
| 223-426, gnl|monDom2|scaffold_13 (8352777-8353014) | |
| 223-426, gnl|oryCun1|scaffold_206495 (113860-114097) | |
| 223-426, gnl|panTro1|chr1 (186546638-186546876) | |
| 223-426, gnl|rheMac2|chr1 (163960917-163960679) | |
| 223-426, gnl|rn3|chr13 (44299276-44299038) | |
| 223-426, gnl|tetNig1|chr11 (8860207-8860433) | |
| 223-426, gnl|xenTro1|scaffold_736 (557210-556980) |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 92-222, gnl|bosTau2|chr16 (1056562-1056692) | |
| 92-222, gnl|canFam2|chr38 (5671961-5672120) | |
| 92-222, gnl|danRer3|chr11 (23353541-23353376) | |
| 92-222, gnl|dasNov1|scaffold_28772 (7080-7240) | |
| 92-222, gnl|echTel1|scaffold_208163 (4670-4828) | |
| 92-222, gnl|fr1|chrUn (198938369-198938528) | |
| 92-222, gnl|galGal2|chr26 (1030490-1030653) | |
| 92-222, gnl|hg17|chr1 (120728708-120728867) | |
| 92-222, gnl|Hg17|chr1 (202955293-202955423) | |
| 92-222, gnl|loxAfr1|scaffold_54743 (5518-5677) | |
| 92-222, gnl|mm7|chr1 (131259441-131259282) | |
| 92-222, gnl|Mm7|chr1 (131259420-131259290) | |
| 92-222, gnl|monDom2|scaffold_13 (8346960-8347120) | |
| 92-222, gnl|oryCun1|scaffold_206495 (105181-105337) | |
| 92-222, gnl|panTro1|chr1 (186538856-186539015) | |
| 92-222, gnl|rheMac2|chr1 (163968547-163968388) | |
| 92-222, gnl|rn3|chr13 (44307483-44307324) | |
| 92-222, gnl|tetNig1|chr11 (8859814-8859957) | |
| 92-222, gnl|xenTro1|scaffold_736 (557628-557480) | |
| 223-426, gnl|bosTau2|chr16 (4158760-4158963) | |
| 223-426, gnl|canFam2|chr38 (5680010-5680248) | |
| 223-426, gnl|danRer3|chr11 (23351800-23351561) | |
| 223-426, gnl|dasNov1|scaffold_292873 (829-596) | |
| 223-426, gnl|echTel1|scaffold_240447 (3833-3595) | |
| 223-426, gnl|fr1|chrUn (198939899-198940134) | |
| 223-426, gnl|galGal2|chr26 (1034723-1034961) | |
| 223-426, gnl|hg17|chr1 (120736596-120736834) | |
| 223-426, gnl|Hg17|chr1 (202963176-202963379) | |
| 223-426, gnl|loxAfr1|scaffold_5535 (15524-15296) | |
| 223-426, gnl|mm7|chr1 (131253465-131253227) | |
| 223-426, gnl|Mm7|chr1 (131253452-131253249) | |
| 223-426, gnl|monDom2|scaffold_13 (8352777-8353014) | |
| 223-426, gnl|oryCun1|scaffold_206495 (113860-114097) | |
| 223-426, gnl|panTro1|chr1 (186546638-186546876) | |
| 223-426, gnl|rheMac2|chr1 (163960917-163960679) | |
| 223-426, gnl|rn3|chr13 (44299276-44299038) | |
| 223-426, gnl|tetNig1|chr11 (8860207-8860433) | |
| 223-426, gnl|xenTro1|scaffold_736 (557210-556980) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| pla (0.133672) |