rplac_14893.y1
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GATGTTGGAGCGGCTTGGTATGTTTTTTGTCTCCGAACGCGAAAACGTGAACTGCCATCA CCCTCAACCCACGATGGACCCCCAGACCGCTTTGCCATCCTCAGGGTCGTTCCCACTGCC TCTGCCCCCCCCACAACTCACCTCATCCACCTGGGCCTGGGTCTGCTGCAGTCTCCTGTT ACTGGTGAGGTTTGGAGGGGGCGCGGGGGGGCCTCCCTCCCCAGCTGGGGCGGCGGGGGG TGCGGTCGCAGCGGTTGCCGACCTGAGGGGCACCGACGGATTAACATCCAGGCCCTGGAG CCCTCGGCCCCGCAGCGAGGGCTCCGCCCATCCGTCTGTCCATCCATCCGTGCCCCCCTT CCTCCTTCTCGGGAGGAGAGCCACCCGAAGGGAGCCATGGCCTTCGCCCG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GATGTTGGAGCGGCTTGGTATGTTTTTTGTCTCCGAACGCGAAAACGTGAACTGCCATCA CCCTCAACCCACGATGGACCCCCAGACCGCTTTGCCATCCTCAGGGTCGTTCCCACTGCC TCTGCCCCCCCCACAACTCACCTCATCCACCTGGGCCTGGGTCTGCTGCAGTCTCCTGTT ACTGGTGAGGTTTGGAGGGGGCGCGGGGGGGCCTCCCTCCCCAGCTGGGGCGGCGGGGGG TGCGGTCGCAGCGGTTGCCGACCTGAGGGGCACCGACGGATTAACATCCAGGCCCTGGAG CCCTCGGCCCCGCAGCGAGGGCTCCGCCCATCCGTCTGTCCATCCATCCGTGCCCCCCTT CCTCCTTCTCGGGAGGAGAGCCACCCGAAGGGAGCCATGGCCTTCGCCCG |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 259-365, - strand, RNAz p=0.98952 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 259-365, - strand, RNAz p=0.98952 |
| Predicted microRNA(s): 2 entry(ies) | More info |
| Predicted microRNA(s): 2 entry(ies) | Help | Less info |
| 283-405, - strand, RNAmicro p=0.995704 | |
| 186-277, + strand, RNAmicro p=0.909644 |
| Predicted microRNA(s): 2 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro
| 283-405, - strand, RNAmicro p=0.995704 | |
| 186-277, + strand, RNAmicro p=0.909644 |
| Aligned organism(s): 3 entry(ies) | More info |
| Aligned organism(s): 3 entry(ies) | Help | Less info |
| 43-410, gnl|bosTau2|chr2 (77489666-77490049) | |
| 43-410, gnl|Hg17|chr17 (8006192-8006559) | |
| 43-410, gnl|Mm7|chr11 (69170922-69170532) |
| Aligned organism(s): 3 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 43-410, gnl|bosTau2|chr2 (77489666-77490049) | |
| 43-410, gnl|Hg17|chr17 (8006192-8006559) | |
| 43-410, gnl|Mm7|chr11 (69170922-69170532) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| pla (0.133672) |