Non-Coding RNA Search

rplac_15421.y1

Sequence:


               
               AAGCCTCGGTGGCCCGAGTTTGGCTTCAACTCAGGTCTCCTGAATTTCTGCTGTAGGAAC
CTCCACTCTCGTCCATCCATAATGATGACAAGCATTCCAGAGAGAAGGCCCGGGGCGGCA
GAGACGATCTGGAGTTGAAGAGAGAGCAAGGCGGCAGTGAGAGCACGCCAGGCCCCAGGA
TTACTGAAGAGCTAACTCTCCTTCTTGGGAGAGTTATTGTCTTACCCTAACTGTTGCTGA
GACCATACTGGAAGAAGATGCTGGTGTGGGAATCCCCTGGGAAAAAAAGAATTTTCATTG
TCAAAGGAAATGCAGCAAAGAGAGCTTCTTCCTACCAAGCCAACAATGAGTTTGGACTCC
TAGGAAACCATCATTCAAACCAGGATTGAGAAGCAACCGTTCCTCCATCTTCATGGTTGA
TCTTCTCTGGGCCAGCGATATGCACCATGATCCTCTCTTGCGGTGGCCAGTGGCAGCAAG
ACACAGCTCCTGGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAGCCTCGGTGGCCCGAGTTTGGCTTCAACTCAGGTCTCCTGAATTTCTGCTGTAGGAAC
CTCCACTCTCGTCCATCCATAATGATGACAAGCATTCCAGAGAGAAGGCCCGGGGCGGCA
GAGACGATCTGGAGTTGAAGAGAGAGCAAGGCGGCAGTGAGAGCACGCCAGGCCCCAGGA
TTACTGAAGAGCTAACTCTCCTTCTTGGGAGAGTTATTGTCTTACCCTAACTGTTGCTGA
GACCATACTGGAAGAAGATGCTGGTGTGGGAATCCCCTGGGAAAAAAAGAATTTTCATTG
TCAAAGGAAATGCAGCAAAGAGAGCTTCTTCCTACCAAGCCAACAATGAGTTTGGACTCC
TAGGAAACCATCATTCAAACCAGGATTGAGAAGCAACCGTTCCTCCATCTTCATGGTTGA
TCTTCTCTGGGCCAGCGATATGCACCATGATCCTCTCTTGCGGTGGCCAGTGGCAGCAAG
ACACAGCTCCTGGT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               5-172, gnl|bosTau2|chr11 (54548814-54548653)
               


               
               178-413, gnl|bosTau2|chr11 (54544775-54544543)
               

               
               178-413, gnl|Hg17|chr2 (26125720-26125175)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               5-172, gnl|bosTau2|chr11 (54548814-54548653)
               


               
               178-413, gnl|bosTau2|chr11 (54544775-54544543)
               

               
               178-413, gnl|Hg17|chr2 (26125720-26125175)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               pla (0.133672)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pla (0.133672)

	5-172, gnl\|bosTau2\|chr11 (54548814-54548653)

	178-413, gnl\|bosTau2\|chr11 (54544775-54544543)
	178-413, gnl\|Hg17\|chr2 (26125720-26125175)