Non-Coding RNA Search

rplac_15537.y1

Sequence:


               
               GAGTCTTTGCGCGTAGCTCCGACCTCACGGAGCATCAGAGGATTCACGACAGAAAGAAGC
CCTCTGGAGGGAAAAACTACATTCGGTCTGTCATCCGCAGCTTAGCTTCTGCTGACCCTC
AGACCAGTTACGCAGGCTGGGCAGCTCAGGCCAGTTTCGCTGAGCCGCAGCCTCAGACCA
GTTACGCCGAGGAGAAGCGCTACGCGTGTGAGACGTGCGGCGAGTCCTTCCGCAGCCAGG
CCGATCTCCGCGAGCACATGCGCACCCACGAGAAGGAGGAGCCCTACGACTACGGGGCCA
CCTTCGTGCACACGTCCTTCCTCACGGAGCCCCCCAAGAGGGACTCGCCCTTCTACGAGT
GCAAGGACTGTGGCAAGTCGTTCATCCACAACACGGTCCTCACCAAGCACCAGAAGCTCC
ACCTTGAGGAGGAGGAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAGTCTTTGCGCGTAGCTCCGACCTCACGGAGCATCAGAGGATTCACGACAGAAAGAAGC
CCTCTGGAGGGAAAAACTACATTCGGTCTGTCATCCGCAGCTTAGCTTCTGCTGACCCTC
AGACCAGTTACGCAGGCTGGGCAGCTCAGGCCAGTTTCGCTGAGCCGCAGCCTCAGACCA
GTTACGCCGAGGAGAAGCGCTACGCGTGTGAGACGTGCGGCGAGTCCTTCCGCAGCCAGG
CCGATCTCCGCGAGCACATGCGCACCCACGAGAAGGAGGAGCCCTACGACTACGGGGCCA
CCTTCGTGCACACGTCCTTCCTCACGGAGCCCCCCAAGAGGGACTCGCCCTTCTACGAGT
GCAAGGACTGTGGCAAGTCGTTCATCCACAACACGGTCCTCACCAAGCACCAGAAGCTCC
ACCTTGAGGAGGAGGAG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               166-435, gnl|bosTau2|chr18 (55659508-55659239)
               

               
               166-435, gnl|Hg17|chr19 (62017813-62017538)
               

               
               166-435, gnl|Mm7|chr7 (6267645-6267376)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               166-435, gnl|bosTau2|chr18 (55659508-55659239)
               

               
               166-435, gnl|Hg17|chr19 (62017813-62017538)
               

               
               166-435, gnl|Mm7|chr7 (6267645-6267376)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               pla (0.133672)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pla (0.133672)

	166-435, gnl\|bosTau2\|chr18 (55659508-55659239)
	166-435, gnl\|Hg17\|chr19 (62017813-62017538)
	166-435, gnl\|Mm7\|chr7 (6267645-6267376)