Non-Coding RNA Search

rplac_1592.y1

Sequence:


               
               TTTTCTGGGGGTCCGGCCTGACTCAGTAACCGGTTCCACCAAACGCATTTTCTCGATTCA
AACCTCAACCCTGTGCTTCCTAGGGAATCTCGGGTTCTGTCAGGCTCCCGCACCAGCGAA
CGATGATAAAATGGCTTTACTGCAAAGTGGGAGGGGGTCTTCTCTCTGCTCTCTCCCAAG
GTTAAACCCCTTACCCATCCAGAGGGAGTCGAGCAGGGCCATTGCGGCTCAAGAACTCGC
CTGCATTTGGTTAAATTTCATTTTGGGGAACCGGAAAGCGAGGCGCAGGGGGTGACAGGG
CTGAAAGGGTCGGTTCTGGCTGCTCAAGGCGCAGGGAGGGGTCTCGAGGGAATCGAAGAT
AGGTGATGAGGGGCGGTCAGGGGTCCGGGACACGATTCCCTTCCGGCCCGGCACAGAGCC
GCACCCCGCCCGCCGGGCAGGGCCGCAGGCGGCGAGGGCGGCCGGGGCCTCTCCCAGAGC
TAAGGGCCCGGCCCCGGAAACAGGGAGGGGCCGCGGCGAGGCCGAGCCCGCGCCGCAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTTCTGGGGGTCCGGCCTGACTCAGTAACCGGTTCCACCAAACGCATTTTCTCGATTCA
AACCTCAACCCTGTGCTTCCTAGGGAATCTCGGGTTCTGTCAGGCTCCCGCACCAGCGAA
CGATGATAAAATGGCTTTACTGCAAAGTGGGAGGGGGTCTTCTCTCTGCTCTCTCCCAAG
GTTAAACCCCTTACCCATCCAGAGGGAGTCGAGCAGGGCCATTGCGGCTCAAGAACTCGC
CTGCATTTGGTTAAATTTCATTTTGGGGAACCGGAAAGCGAGGCGCAGGGGGTGACAGGG
CTGAAAGGGTCGGTTCTGGCTGCTCAAGGCGCAGGGAGGGGTCTCGAGGGAATCGAAGAT
AGGTGATGAGGGGCGGTCAGGGGTCCGGGACACGATTCCCTTCCGGCCCGGCACAGAGCC
GCACCCCGCCCGCCGGGCAGGGCCGCAGGCGGCGAGGGCGGCCGGGGCCTCTCCCAGAGC
TAAGGGCCCGGCCCCGGAAACAGGGAGGGGCCGCGGCGAGGCCGAGCCCGCGCCGCAG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-536, gnl|bosTau2|chr13 (55873525-55874054)
               

               
               1-536, gnl|Hg17|chr20 (42948605-42948083)
               

               
               1-536, gnl|Mm7|chr2 (163736821-163736336)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-536, gnl|bosTau2|chr13 (55873525-55874054)
               

               
               1-536, gnl|Hg17|chr20 (42948605-42948083)
               

               
               1-536, gnl|Mm7|chr2 (163736821-163736336)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               pla (0.133672)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pla (0.133672)

	1-536, gnl\|bosTau2\|chr13 (55873525-55874054)
	1-536, gnl\|Hg17\|chr20 (42948605-42948083)
	1-536, gnl\|Mm7\|chr2 (163736821-163736336)