Non-Coding RNA Search

rplac_16206.y1

Sequence:


               
               AAGAAAAGAGGAACTTTTAGGGAGAAGCACAGGCAACCGAAAACAGTCAAATGTGATGGA
TGTGCATTTGGGTTATATGATTTCTAAGATTAGTATAATCTCAACATTTGGAGTGCCAAG
GAAATTTGTCAGATGCCTCTGGCTCCTGGCAGTTAGACCTCAAACCAGCCATAAAGTTGA
ATTCATTATTGGGAAACGTATATGTCTTACTGTTATTTGAAAGCAAAAATGGGCTGACAA
AATAGTATCAGGAGTTAAAAATTTGGGGGGGTCCTTTCTCAAGTTCCTCCTGCCCCTTTG
GAAGATCCCTTCCTAGCCCTTTTTCTCTCTACTGCACCTGGCCAGCTTTGAAGGTTTTCC
TTCCCTTTGGTCTTCAGATGTCGCTTCCCTTCTCCATGATGTAACCTCTGGGTCAGACGT
GTGGACGCCCGCTTTTTAATGCAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAGAAAAGAGGAACTTTTAGGGAGAAGCACAGGCAACCGAAAACAGTCAAATGTGATGGA
TGTGCATTTGGGTTATATGATTTCTAAGATTAGTATAATCTCAACATTTGGAGTGCCAAG
GAAATTTGTCAGATGCCTCTGGCTCCTGGCAGTTAGACCTCAAACCAGCCATAAAGTTGA
ATTCATTATTGGGAAACGTATATGTCTTACTGTTATTTGAAAGCAAAAATGGGCTGACAA
AATAGTATCAGGAGTTAAAAATTTGGGGGGGTCCTTTCTCAAGTTCCTCCTGCCCCTTTG
GAAGATCCCTTCCTAGCCCTTTTTCTCTCTACTGCACCTGGCCAGCTTTGAAGGTTTTCC
TTCCCTTTGGTCTTCAGATGTCGCTTCCCTTCTCCATGATGTAACCTCTGGGTCAGACGT
GTGGACGCCCGCTTTTTAATGCAG

Aligned organism(s): 4 entry(ies)

More info

Aligned organism(s): 4 entry(ies)

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               1-250, gnl|bosTau2|chr12 (16122376-16122114)
               

               
               1-250, gnl|Hg17|chr13 (31591389-31591631)
               


               
               274-444, gnl|bosTau2|chr12 (16122064-16121895)
               

               
               274-444, gnl|Hg17|chr13 (31591672-31591856)

Aligned organism(s): 4 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-250, gnl|bosTau2|chr12 (16122376-16122114)
               

               
               1-250, gnl|Hg17|chr13 (31591389-31591631)
               


               
               274-444, gnl|bosTau2|chr12 (16122064-16121895)
               

               
               274-444, gnl|Hg17|chr13 (31591672-31591856)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               pla (0.133672)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pla (0.133672)

	1-250, gnl\|bosTau2\|chr12 (16122376-16122114)
	1-250, gnl\|Hg17\|chr13 (31591389-31591631)

	274-444, gnl\|bosTau2\|chr12 (16122064-16121895)
	274-444, gnl\|Hg17\|chr13 (31591672-31591856)