Non-Coding RNA Search

rplac_18166.y1

Sequence:


               
               CCAAAACTGACACGAGAAGAAATAGAAAACCTATACAGTCTCGGCACTTCCCCGTAAAGA
CAATTCTAGACCCAGAGGCCTCTAAACTGGTGGAAGTCTTCCAAACATTGAAAGAAGAAA
TGACGCCTGTCTTAGACAGTCGTCCAGAGCAAAGAAAGCGGCTCACTTCCCAGGACATTG
TATGGGGCAATAGCATCCTGATGTGCTGTGTCTCTAGCGCACGGTGGGTGAACGGATATG
GTCCATACCTAGCGATGGGACCCGCGATCAGGGCTGCCTCGAGGAGCACAAAGGAGGCAC
TGACTCAGCCTGGGGCCAGGGTGGGGCTGTATTATAAAGGAACACCTAAAAGATACCTGG
GAGTGAGTGGGGGAAAGGTGGGAGGCTTGTCCTGGCAGGAGAGACAGCGGGGCATGAATA
AGTGTGTGTTTAAGAGCTTGCCATGCCTGGAGGTGGGGCCGAGCTGGGGGAGGAGAGGTG
GGCCAGGCTGACCCCGGGAGCCTCTCCTCCCAGCTCCAAGGTCTCCCGTGATAGCCTTTG
TGTCTGGGCCAGCTCACTAACCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCAAAACTGACACGAGAAGAAATAGAAAACCTATACAGTCTCGGCACTTCCCCGTAAAGA
CAATTCTAGACCCAGAGGCCTCTAAACTGGTGGAAGTCTTCCAAACATTGAAAGAAGAAA
TGACGCCTGTCTTAGACAGTCGTCCAGAGCAAAGAAAGCGGCTCACTTCCCAGGACATTG
TATGGGGCAATAGCATCCTGATGTGCTGTGTCTCTAGCGCACGGTGGGTGAACGGATATG
GTCCATACCTAGCGATGGGACCCGCGATCAGGGCTGCCTCGAGGAGCACAAAGGAGGCAC
TGACTCAGCCTGGGGCCAGGGTGGGGCTGTATTATAAAGGAACACCTAAAAGATACCTGG
GAGTGAGTGGGGGAAAGGTGGGAGGCTTGTCCTGGCAGGAGAGACAGCGGGGCATGAATA
AGTGTGTGTTTAAGAGCTTGCCATGCCTGGAGGTGGGGCCGAGCTGGGGGAGGAGAGGTG
GGCCAGGCTGACCCCGGGAGCCTCTCCTCCCAGCTCCAAGGTCTCCCGTGATAGCCTTTG
TGTCTGGGCCAGCTCACTAACCT

Aligned organism(s): 6 entry(ies)

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Aligned organism(s): 6 entry(ies)

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               1-207, gnl|bosTau2|chr18 (38622067-38621864)
               

               
               1-207, gnl|canFam2|chr1 (113120540-113119711)
               

               
               1-207, gnl|hg17|chr19 (50488393-50489365)
               

               
               1-207, gnl|Hg17|chr19 (50488571-50488817)
               

               
               1-207, gnl|panTro1|chr20 (47671205-47672177)
               

               
               1-207, gnl|rheMac2|chr19 (51728141-51729109)

Aligned organism(s): 6 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-207, gnl|bosTau2|chr18 (38622067-38621864)
               

               
               1-207, gnl|canFam2|chr1 (113120540-113119711)
               

               
               1-207, gnl|hg17|chr19 (50488393-50489365)
               

               
               1-207, gnl|Hg17|chr19 (50488571-50488817)
               

               
               1-207, gnl|panTro1|chr20 (47671205-47672177)
               

               
               1-207, gnl|rheMac2|chr19 (51728141-51729109)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               pla (0.133672)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pla (0.133672)

	1-207, gnl\|bosTau2\|chr18 (38622067-38621864)
	1-207, gnl\|canFam2\|chr1 (113120540-113119711)
	1-207, gnl\|hg17\|chr19 (50488393-50489365)
	1-207, gnl\|Hg17\|chr19 (50488571-50488817)
	1-207, gnl\|panTro1\|chr20 (47671205-47672177)
	1-207, gnl\|rheMac2\|chr19 (51728141-51729109)