rplac_3121.y1
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TTTCTGAAGCTTTGGGGGGGCTGGGGTGAGGGTGGGCCAAAGTGAAGGCCCCATTGCCAC CTGCTTGGCCTCCCTGCCAGATACGAGTGGTTCCAGGAGCTGGAGCTGAAGTGGTACGCC CTGCCAGCCGTGGCCAACATGCTGCTCGAGGTGGGCGGCCTTGAGTTCCCAGGGCGCCCC TTCAATGGCTGGTACATGGGCACGGAGATCGGGGTCCGGGACTTCTGCGACGTCCAGCGC TACAACATCCTGGAGGTACCAGGACCGTCTGGCTGGGCCGGCTGGAGGTGTGGGCCTTTG GGTGGGGTCCCAAGGACCGACTCTCCCCCATTTCTCTGCCTCTGTAGGAAGTGGGCAGAA GGATGGGCCTGGAAACACACAAGCTGGCCTCCCTCTGGAAAGACCGCGCTGTCGTGGAGA TCAATGTCGCCGTGCTCCACAGTTTCCAGGCATGTCTGCTGTTTGTGGGTCTGAAGATCA TCTGGTTGGAAGGCCATCTGATCTAGCTTGTGCCTCATTGAGGGGACGGGGGGGCCAGGG CAGCTCTGAGACGGGACAGGAAGAGCCCCCTGGGGCCGGCCCAGCTCGGGAAGGCCCCAC GGCTGTGGGCCACA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TTTCTGAAGCTTTGGGGGGGCTGGGGTGAGGGTGGGCCAAAGTGAAGGCCCCATTGCCAC CTGCTTGGCCTCCCTGCCAGATACGAGTGGTTCCAGGAGCTGGAGCTGAAGTGGTACGCC CTGCCAGCCGTGGCCAACATGCTGCTCGAGGTGGGCGGCCTTGAGTTCCCAGGGCGCCCC TTCAATGGCTGGTACATGGGCACGGAGATCGGGGTCCGGGACTTCTGCGACGTCCAGCGC TACAACATCCTGGAGGTACCAGGACCGTCTGGCTGGGCCGGCTGGAGGTGTGGGCCTTTG GGTGGGGTCCCAAGGACCGACTCTCCCCCATTTCTCTGCCTCTGTAGGAAGTGGGCAGAA GGATGGGCCTGGAAACACACAAGCTGGCCTCCCTCTGGAAAGACCGCGCTGTCGTGGAGA TCAATGTCGCCGTGCTCCACAGTTTCCAGGCATGTCTGCTGTTTGTGGGTCTGAAGATCA TCTGGTTGGAAGGCCATCTGATCTAGCTTGTGCCTCATTGAGGGGACGGGGGGGCCAGGG CAGCTCTGAGACGGGACAGGAAGAGCCCCCTGGGGCCGGCCCAGCTCGGGAAGGCCCCAC GGCTGTGGGCCACA |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 258-455, + strand, RNAz p=0.99817 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 258-455, + strand, RNAz p=0.99817 |
| Aligned organism(s): 8 entry(ies) | More info |
| Aligned organism(s): 8 entry(ies) | Help | Less info |
| 1-500, gnl|bosTau2|chr19 (12837553-12837056) | |
| 1-500, gnl|Hg17|chr17 (23130671-23129791) | |
| 1-500, gnl|Mm7|chr11 (79021472-79021976) | |
| 48-257, gnl|bosTau2|chr17 (33140948-33141160) | |
| 48-257, gnl|Hg17|chr12 (116173119-116172908) | |
| 48-257, gnl|Mm7|chr5 (117134266-117134478) | |
| 502-614, gnl|bosTau2|chr19 (12835167-12835054) | |
| 502-614, gnl|Mm7|chr11 (79023243-79023353) |
| Aligned organism(s): 8 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-500, gnl|bosTau2|chr19 (12837553-12837056) | |
| 1-500, gnl|Hg17|chr17 (23130671-23129791) | |
| 1-500, gnl|Mm7|chr11 (79021472-79021976) | |
| 48-257, gnl|bosTau2|chr17 (33140948-33141160) | |
| 48-257, gnl|Hg17|chr12 (116173119-116172908) | |
| 48-257, gnl|Mm7|chr5 (117134266-117134478) | |
| 502-614, gnl|bosTau2|chr19 (12835167-12835054) | |
| 502-614, gnl|Mm7|chr11 (79023243-79023353) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| pla (0.133672) |