Non-Coding RNA Search

rplac_3662.y1

Sequence:


               
               AGGTGAAATCTCATTTTTATGAAGGATTTTATATGCGTGAGTGTGTGTGTGTGTTGCCAT
AGATTTAAACATCTTTTCCCCTCTGTGTTCTAATGATTACTGGCGACAAAATGACTCTCT
CCCATGCTTATAGATTCATTTTAAAGGTGGGAGGGTGCATAAAAATGTCTAGTTTCCATG
TAGAGTAGTACTCATAATTCAAATAGATGGCAGTATTTTAAATTTGCTCGTCTGATATTT
TTCCCAGGTGGTGGCAATTCTGCAGAAGTTCCGTTCAAACAGTGAGAGTGCCCTGGGATT
AAATTTCATCAAGGAGCTCACGCTAAGATTCGGGCACTGTTCGAAGTGGGTCGGCAGGCA
AGCTTGGGCTTTCATGTGTCAGGTTAGCACCACCTGGGGGACATGTCTGCCCTGGACGGA
TGTTTGCCACGTGCATTTCATGAACATCAGGAAAAGCATCCCCGCTCTGGCGGAGGGACT
AGCCAGGAACTTGGGGATCAGCACACCGAACCCTCTTCACCCCCAGGAGATTGTTGAGCA
ACCCAGTCAGGCCCAGGGACGTGCCCGGGGTTACCAGCCTGCATGGGCATTCAGCCCCTG
GAGCATGACTGAGCATCTCCTGTGTGCCAGGCACGCCCCGGATGCTGGGCACAGAGGCG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGGTGAAATCTCATTTTTATGAAGGATTTTATATGCGTGAGTGTGTGTGTGTGTTGCCAT
AGATTTAAACATCTTTTCCCCTCTGTGTTCTAATGATTACTGGCGACAAAATGACTCTCT
CCCATGCTTATAGATTCATTTTAAAGGTGGGAGGGTGCATAAAAATGTCTAGTTTCCATG
TAGAGTAGTACTCATAATTCAAATAGATGGCAGTATTTTAAATTTGCTCGTCTGATATTT
TTCCCAGGTGGTGGCAATTCTGCAGAAGTTCCGTTCAAACAGTGAGAGTGCCCTGGGATT
AAATTTCATCAAGGAGCTCACGCTAAGATTCGGGCACTGTTCGAAGTGGGTCGGCAGGCA
AGCTTGGGCTTTCATGTGTCAGGTTAGCACCACCTGGGGGACATGTCTGCCCTGGACGGA
TGTTTGCCACGTGCATTTCATGAACATCAGGAAAAGCATCCCCGCTCTGGCGGAGGGACT
AGCCAGGAACTTGGGGATCAGCACACCGAACCCTCTTCACCCCCAGGAGATTGTTGAGCA
ACCCAGTCAGGCCCAGGGACGTGCCCGGGGTTACCAGCCTGCATGGGCATTCAGCCCCTG
GAGCATGACTGAGCATCTCCTGTGTGCCAGGCACGCCCCGGATGCTGGGCACAGAGGCG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               6-523, gnl|bosTau2|chr13 (39431305-39431818)
               

               
               6-523, gnl|Hg17|chr20 (56244066-56243567)
               

               
               6-523, gnl|Mm7|chr2 (173329204-173328730)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               6-523, gnl|bosTau2|chr13 (39431305-39431818)
               

               
               6-523, gnl|Hg17|chr20 (56244066-56243567)
               

               
               6-523, gnl|Mm7|chr2 (173329204-173328730)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               pla (0.133672)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pla (0.133672)

	6-523, gnl\|bosTau2\|chr13 (39431305-39431818)
	6-523, gnl\|Hg17\|chr20 (56244066-56243567)
	6-523, gnl\|Mm7\|chr2 (173329204-173328730)