Non-Coding RNA Search

rplac_4440.y1

Sequence:


               
               TTTTTTTTTTTTTTTTCCAAATTTAAAATAGTCTTCACATCATTAAGAACAAAAGTCTCT
GACGTGGCAGACCAATTTAAGTAAAACCCACCACTATTACCCCGTTGGAGGAACAAACTC
AAACCCAACTTTTCCAAGGCAGGGCTGCGGAGTTACGTAACAGGTCGGTTTCAGCAACAG
GCAATGCCAGAAAGAAAAACAAAACGCAAACTGCCTCCTGAATAATCTTAAAAGCCAACG
AGTATGGGGTTCACGACTGGAGGCAAAAGTTCCGTTTCTGCTGGGGGAGCCTCGACCCTC
CTCTCACCAGCGTCCCTGAGCCCAGGGAAATCTGAATCCGCCGCTCAGTGGGCATAAGAG
GGGTAAGGGAGAGTGCTCTGAAGGTTCCGACCACAGGTAAGGGGGTGGGGCAGGGCGGTC
GGATCAGCCAGAGGAGGGGACCGGAGCAGATCACCGACCCAGCTGGAGAACTCGGGGACA
GGTCATCCCCGACTTGGCCAAAGACAGACCCGGAAGGGGACTTGGGACAGATCGCGTAAG
ACCTAGCCTGAACGAGATCCTGAAATCACCCGGACGCAACCAGAGCAGGACTTGAGGTAG
GTTTGCCTGGATCCGGCTGGAGAGCGGGAGCCGGGGCAGGTTACTCCGGGGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTTTTTTTTTTTTTTCCAAATTTAAAATAGTCTTCACATCATTAAGAACAAAAGTCTCT
GACGTGGCAGACCAATTTAAGTAAAACCCACCACTATTACCCCGTTGGAGGAACAAACTC
AAACCCAACTTTTCCAAGGCAGGGCTGCGGAGTTACGTAACAGGTCGGTTTCAGCAACAG
GCAATGCCAGAAAGAAAAACAAAACGCAAACTGCCTCCTGAATAATCTTAAAAGCCAACG
AGTATGGGGTTCACGACTGGAGGCAAAAGTTCCGTTTCTGCTGGGGGAGCCTCGACCCTC
CTCTCACCAGCGTCCCTGAGCCCAGGGAAATCTGAATCCGCCGCTCAGTGGGCATAAGAG
GGGTAAGGGAGAGTGCTCTGAAGGTTCCGACCACAGGTAAGGGGGTGGGGCAGGGCGGTC
GGATCAGCCAGAGGAGGGGACCGGAGCAGATCACCGACCCAGCTGGAGAACTCGGGGACA
GGTCATCCCCGACTTGGCCAAAGACAGACCCGGAAGGGGACTTGGGACAGATCGCGTAAG
ACCTAGCCTGAACGAGATCCTGAAATCACCCGGACGCAACCAGAGCAGGACTTGAGGTAG
GTTTGCCTGGATCCGGCTGGAGAGCGGGAGCCGGGGCAGGTTACTCCGGGGA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               34-649, gnl|bosTau2|chr7 (2282567-2281925)
               

               
               34-649, gnl|Hg17|chr19 (18805265-18804444)
               

               
               34-649, gnl|Mm7|chr8 (68806982-68807709)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               34-649, gnl|bosTau2|chr7 (2282567-2281925)
               

               
               34-649, gnl|Hg17|chr19 (18805265-18804444)
               

               
               34-649, gnl|Mm7|chr8 (68806982-68807709)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               pla (0.133672)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pla (0.133672)

	34-649, gnl\|bosTau2\|chr7 (2282567-2281925)
	34-649, gnl\|Hg17\|chr19 (18805265-18804444)
	34-649, gnl\|Mm7\|chr8 (68806982-68807709)