Non-Coding RNA Search

rplac_4759.y1

Sequence:


               
               CTGCGAGGTGGAAGGCGGCGGCGCGCTGGCTGACAGGCGGTTCCTCAGGCGGGCTGCAGC
AGCGGCGGCCGGAGCGCCTCTCCTTGGCTGAGGTTGTGCGCCCCCTCCTCGCCGCGCCCC
GGGCCCGCGCGGGATTGTGCGTCCTCCCCCCTCGTCACTGAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTGCGAGGTGGAAGGCGGCGGCGCGCTGGCTGACAGGCGGTTCCTCAGGCGGGCTGCAGC
AGCGGCGGCCGGAGCGCCTCTCCTTGGCTGAGGTTGTGCGCCCCCTCCTCGCCGCGCCCC
GGGCCCGCGCGGGATTGTGCGTCCTCCCCCCTCGTCACTGAA

Aligned organism(s): 15 entry(ies)

More info

Aligned organism(s): 15 entry(ies)

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               8-161, gnl|bosTau2|chr11 (81416378-81416528)
               

               
               8-161, gnl|canFam2|chr12 (68583075-68583204)
               

               
               8-161, gnl|dasNov1|scaffold_6271 (16762-16888)
               

               
               8-161, gnl|echTel1|scaffold_312052 (41989-42098)
               

               
               8-161, gnl|galGal2|chr3 (65775227-65775120)
               

               
               8-161, gnl|hg17|chr6 (108987740-108987866)
               

               
               8-161, gnl|Hg17|chr6 (108987746-108987896)
               

               
               8-161, gnl|loxAfr1|scaffold_44 (126526-126400)
               

               
               8-161, gnl|mm7|chr10 (42087339-42087234)
               

               
               8-161, gnl|Mm7|chr10 (42087331-42087202)
               

               
               8-161, gnl|monDom2|scaffold_0 (111975337-111975193)
               

               
               8-161, gnl|panTro1|chr5 (111295287-111295401)
               

               
               8-161, gnl|rheMac2|chr4 (155337961-155337835)
               

               
               8-161, gnl|rn3|chr20 (46285765-46285660)
               

               
               8-161, gnl|xenTro1|scaffold_4834 (12488-12363)

Aligned organism(s): 15 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               8-161, gnl|bosTau2|chr11 (81416378-81416528)
               

               
               8-161, gnl|canFam2|chr12 (68583075-68583204)
               

               
               8-161, gnl|dasNov1|scaffold_6271 (16762-16888)
               

               
               8-161, gnl|echTel1|scaffold_312052 (41989-42098)
               

               
               8-161, gnl|galGal2|chr3 (65775227-65775120)
               

               
               8-161, gnl|hg17|chr6 (108987740-108987866)
               

               
               8-161, gnl|Hg17|chr6 (108987746-108987896)
               

               
               8-161, gnl|loxAfr1|scaffold_44 (126526-126400)
               

               
               8-161, gnl|mm7|chr10 (42087339-42087234)
               

               
               8-161, gnl|Mm7|chr10 (42087331-42087202)
               

               
               8-161, gnl|monDom2|scaffold_0 (111975337-111975193)
               

               
               8-161, gnl|panTro1|chr5 (111295287-111295401)
               

               
               8-161, gnl|rheMac2|chr4 (155337961-155337835)
               

               
               8-161, gnl|rn3|chr20 (46285765-46285660)
               

               
               8-161, gnl|xenTro1|scaffold_4834 (12488-12363)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               pla (0.133672)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pla (0.133672)

	8-161, gnl\|bosTau2\|chr11 (81416378-81416528)
	8-161, gnl\|canFam2\|chr12 (68583075-68583204)
	8-161, gnl\|dasNov1\|scaffold_6271 (16762-16888)
	8-161, gnl\|echTel1\|scaffold_312052 (41989-42098)
	8-161, gnl\|galGal2\|chr3 (65775227-65775120)
	8-161, gnl\|hg17\|chr6 (108987740-108987866)
	8-161, gnl\|Hg17\|chr6 (108987746-108987896)
	8-161, gnl\|loxAfr1\|scaffold_44 (126526-126400)
	8-161, gnl\|mm7\|chr10 (42087339-42087234)
	8-161, gnl\|Mm7\|chr10 (42087331-42087202)
	8-161, gnl\|monDom2\|scaffold_0 (111975337-111975193)
	8-161, gnl\|panTro1\|chr5 (111295287-111295401)
	8-161, gnl\|rheMac2\|chr4 (155337961-155337835)
	8-161, gnl\|rn3\|chr20 (46285765-46285660)
	8-161, gnl\|xenTro1\|scaffold_4834 (12488-12363)