Non-Coding RNA Search

rplac_4977.y1

Sequence:


               
               AAACAGCTTTAAGAGCAACTAACTTGGAGGAACTGGAATTATCTGCAGGAAGAGAATTTA
GCGGGTGGAAGGGTTGCGGGGGCAACGATCTCTAAAACTTTCAGCCTTGCGTTCTCAGGA
TGCTCTGTGCCCTCCCCCCGGGGAGTCCCGATGCCCCAATTAATCCTTCCCTCCTCTCAG
ATCCTTTAAAAATTGTGCTCGCGGGGGGTCCTAACAGGAACCCCCGCAGAATTACAGTGT
TCAGATACTCTCTCCCCAAACCGGGAAGGCGTCCCGGTAGAAGATCTTCAGACGCTTGGG
GCTGTGTGAGCCTCGCCAACCTGGGGGGGCGGTGGGCGGGAGCGCCGGGATCCCCTCGGC
CATCCCCGCCCCCGCCTCCTCCCCTCCGCGCTCCTCCCCTCCGCGCCCGGGCCGCCGACC
CCAGGCCAGGGCGGCGCGCGCTCTCCCACCCGCGCCTCTGGGGACTCGCAGACGGCAGCG
AGACCGGCCGGCGCGCTGGGCATGCTCAGTTGCCCGGCGCCGGGCTCGCGAGTCGGAAGC
CTGTGCGCGGCGGTCGCCGCTGAGCCGGCCGGAGCGCACGGAGAGAGCGCTGGACGCGCT
GCAGCGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAACAGCTTTAAGAGCAACTAACTTGGAGGAACTGGAATTATCTGCAGGAAGAGAATTTA
GCGGGTGGAAGGGTTGCGGGGGCAACGATCTCTAAAACTTTCAGCCTTGCGTTCTCAGGA
TGCTCTGTGCCCTCCCCCCGGGGAGTCCCGATGCCCCAATTAATCCTTCCCTCCTCTCAG
ATCCTTTAAAAATTGTGCTCGCGGGGGGTCCTAACAGGAACCCCCGCAGAATTACAGTGT
TCAGATACTCTCTCCCCAAACCGGGAAGGCGTCCCGGTAGAAGATCTTCAGACGCTTGGG
GCTGTGTGAGCCTCGCCAACCTGGGGGGGCGGTGGGCGGGAGCGCCGGGATCCCCTCGGC
CATCCCCGCCCCCGCCTCCTCCCCTCCGCGCTCCTCCCCTCCGCGCCCGGGCCGCCGACC
CCAGGCCAGGGCGGCGCGCGCTCTCCCACCCGCGCCTCTGGGGACTCGCAGACGGCAGCG
AGACCGGCCGGCGCGCTGGGCATGCTCAGTTGCCCGGCGCCGGGCTCGCGAGTCGGAAGC
CTGTGCGCGGCGGTCGCCGCTGAGCCGGCCGGAGCGCACGGAGAGAGCGCTGGACGCGCT
GCAGCGG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-607, gnl|bosTau2|chr3 (29203425-29204015)
               

               
               1-607, gnl|Hg17|chr1 (108220336-108219748)
               

               
               1-607, gnl|Mm7|chr3 (109158524-109159119)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-607, gnl|bosTau2|chr3 (29203425-29204015)
               

               
               1-607, gnl|Hg17|chr1 (108220336-108219748)
               

               
               1-607, gnl|Mm7|chr3 (109158524-109159119)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               pla (0.133672)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pla (0.133672)

	1-607, gnl\|bosTau2\|chr3 (29203425-29204015)
	1-607, gnl\|Hg17\|chr1 (108220336-108219748)
	1-607, gnl\|Mm7\|chr3 (109158524-109159119)